RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 RDH16O75452 317 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 SEMA3DO95025 777 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 SMIM10L1P0DMW3 83 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 ITGAXP20702 1163 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 GRNP28799 593 aaKnown RBP9.49□□□□□ -0.89
NUP54-203ENST00000504173 STAT5AP42229 794 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 SSR2P43308 183 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 RPL14P50914 215 aaKnown RBP9.49□□□□□ -0.89
NUP54-203ENST00000504173 MTTPP55157 894 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 BTN3A2P78410 334 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 MAT1AQ00266 395 aaKnown RBP9.49□□□□□ -0.89
NUP54-203ENST00000504173 HMGCS1Q01581 520 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 DSG2Q14126 1118 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 SLC9A5Q14940 896 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 AP5B1Q2VPB7 878 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 MLIPQ5VWP3 458 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 LCN10Q6JVE6 187 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 FAM199XQ6PEV8 388 aaPredicted RBP9.49□□□□□ -0.89
NUP54-203ENST00000504173 UBE3DQ7Z6J8 389 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 DTX1Q86Y01 620 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 PDSS2Q86YH6 399 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 DDIASQ8IXT1 998 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 CT55Q8WUE5 264 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 CKAP2Q8WWK9 683 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 NKD1Q969G9 470 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 SMIM10Q96HG1 83 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 MAGEB18Q96M61 343 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 TBCDQ9BTW9 1192 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 ACPTQ9BZG2 426 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 ROGDIQ9GZN7 287 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 AKIRIN1Q9H9L7 192 aaPredicted RBP9.49□□□□□ -0.89
NUP54-203ENST00000504173 PNPOQ9NVS9 261 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 AHSPQ9NZD4 102 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 HCN3Q9P1Z3 774 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 GPN3Q9UHW5 284 aaPredicted RBP9.49□□□□□ -0.89
NUP54-203ENST00000504173 HAO1Q9UJM8 370 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 CROTQ9UKG9 612 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 DNAJC15Q9Y5T4 150 aa9.49□□□□□ -0.89
NUP54-203ENST00000504173 SEC16AO15027 2179 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 SCN3AQ9NY46 2000 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 LOC101059948A0A1B0GTJ6 334 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 SERTM1A2A2V5 107 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 SLC28A1O00337 649 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 PLPP1O14494 284 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 PIP5K1BO14986 540 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 RGS14O43566 566 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 B3GALT2O43825 422 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 SKAP2O75563 359 aaPredicted RBP9.48□□□□□ -0.89
NUP54-203ENST00000504173 ONECUT2O95948 504 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 TCN2P20062 427 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 HIST1H1TP22492 207 aaPredicted RBP9.48□□□□□ -0.89
NUP54-203ENST00000504173 CERS1P27544 350 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 DLSTP36957 453 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 OLR1P78380 273 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 OCRLQ01968 901 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 NCF4Q15080 339 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 TGIF1Q15583 401 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 PDCD2Q16342 344 aaPredicted RBP9.48□□□□□ -0.89
NUP54-203ENST00000504173 TBR1Q16650 682 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 UGT3A2Q3SY77 523 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 SPDYAQ5MJ70 313 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 ZNF787Q6DD87 383 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 OR4C11Q6IEV9 310 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 FAM198BQ6UWH4 519 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 ZNF517Q6ZMY9 492 aaPredicted RBP9.48□□□□□ -0.89
NUP54-203ENST00000504173 ZNF793Q6ZN11 406 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 RNF165Q6ZSG1 346 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 COX15Q7KZN9 410 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 PAGE2Q7Z2X7 111 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 TRIM46Q7Z4K8 759 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 NUDT13Q86X67 352 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 CRLF3Q8IUI8 442 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 KIAA1143Q96AT1 154 aaPredicted RBP9.48□□□□□ -0.89
NUP54-203ENST00000504173 MIB2Q96AX9 1013 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 FKBP10Q96AY3 582 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 POM121Q96HA1 1249 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 QRFPRQ96P65 431 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 SERINC2Q96SA4 455 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 SORBS1Q9BX66 1292 aaKnown RBP9.48□□□□□ -0.89
NUP54-203ENST00000504173 MRPL1Q9BYD6 325 aaKnown RBP9.48□□□□□ -0.89
NUP54-203ENST00000504173 TUBB1Q9H4B7 451 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 PFDN4Q9NQP4 134 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 PRDM7Q9NQW5 492 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 SLC22A11Q9NSA0 550 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 TRPC4Q9UBN4 977 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 VPS29Q9UBQ0 182 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 CTSFQ9UBX1 484 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 MARCOQ9UEW3 520 aaPredicted RBP9.48□□□□□ -0.89
NUP54-203ENST00000504173 MAP4K5Q9Y4K4 846 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 PTGDR2Q9Y5Y4 395 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 APCP25054 2843 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 NAV3Q8IVL0 2385 aa9.48□□□□□ -0.89
NUP54-203ENST00000504173 FER1L5A0AVI2 2057 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 ARHGAP10A1A4S6 786 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 C21orf140B9A014 251 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 PSMD12O00232 456 aaPredicted RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 CHST10O43529 356 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 RSL1D1O76021 490 aaKnown RBP9.47□□□□□ -0.89
NUP54-203ENST00000504173 ALBP02768 609 aa9.47□□□□□ -0.89
NUP54-203ENST00000504173 LINC00032P0C843 101 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms