RNA–Protein interactions for RNA: ENST00000498534.5

CNOT4-211, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 481 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-211ENST00000498534 STX4Q12846 297 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 ILF2Q12905 390 aaKnown RBP11.19□□□□□ -0.62
CNOT4-211ENST00000498534 FRG1Q14331 258 aaKnown RBP11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SLBPQ14493 270 aaKnown RBP eCLIP11.19□□□□□ -0.62
CNOT4-211ENST00000498534 ELAVL1Q15717 326 aaKnown RBP11.19□□□□□ -0.62
CNOT4-211ENST00000498534 GXYLT1Q4G148 440 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 TRIM40Q6P9F5 258 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 HSDL2Q6YN16 418 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SPNS3Q6ZMD2 512 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SYDE1Q6ZW31 735 aaPredicted RBP11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SLC22A16Q86VW1 577 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SCUBE1Q8IWY4 988 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SLC35F6Q8N357 371 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 PSD4Q8NDX1 1056 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 OR2L5Q8NG80 312 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 KIAA1191Q96A73 305 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SERINC2Q96SA4 455 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 TREX2Q9BQ50 279 aaPredicted RBP11.19□□□□□ -0.62
CNOT4-211ENST00000498534 REXO4Q9GZR2 422 aaKnown RBP11.19□□□□□ -0.62
CNOT4-211ENST00000498534 CNOT10Q9H9A5 744 aaKnown RBP11.19□□□□□ -0.62
CNOT4-211ENST00000498534 COPS7BQ9H9Q2 264 aaPredicted RBP11.19□□□□□ -0.62
CNOT4-211ENST00000498534 PLAC1Q9HBJ0 212 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SLC24A3Q9HC58 644 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 MYOTQ9UBF9 498 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SNX12Q9UMY4 172 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 RNF6Q9Y252 685 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 HRH3Q9Y5N1 445 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 TEX264Q9Y6I9 313 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 MED13LQ71F56 2210 aa11.19□□□□□ -0.62
CNOT4-211ENST00000498534 SPG11Q96JI7 2443 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 FAM95CA0A1B0GW59 222 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 C4orf51C9J302 202 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 NPIPA2E9PIF3 369 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 NPIPA3F8WFD2 350 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 CLGNO14967 610 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 ZSCAN12O43309 604 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 IVDP26440 423 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 PPP2R1BP30154 601 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 HNRNPH1P31943 449 aaKnown RBP11.18□□□□□ -0.62
CNOT4-211ENST00000498534 MTTPP55157 894 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 TAS2R39P59534 338 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 TESK1Q15569 626 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 TSNQ15631 228 aaKnown RBP11.18□□□□□ -0.62
CNOT4-211ENST00000498534 XKR6Q5GH73 641 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 NDUFAF5Q5TEU4 345 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 CES4AQ5XG92 561 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 STEAP4Q687X5 459 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 ZC3HC1Q86WB0 502 aaKnown RBP11.18□□□□□ -0.62
CNOT4-211ENST00000498534 TCAIMQ8N3R3 496 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 MARVELD2Q8N4S9 558 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 FAM47BQ8NA70 645 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 MORN4Q8NDC4 146 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 C7orf57Q8NEG2 295 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 OR2M7Q8NG81 312 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 OR5L2Q8NGL0 311 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 OR5M3Q8NGP4 307 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 OR10Q1Q8NGQ4 319 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 RHBDF1Q96CC6 855 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 ALOXE3Q9BYJ1 711 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 UCK2Q9BZX2 261 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 AICDAQ9GZX7 198 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 LIN28AQ9H9Z2 209 aaKnown RBP11.18□□□□□ -0.62
CNOT4-211ENST00000498534 NSMCE4AQ9NXX6 385 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 GPRC5BQ9NZH0 403 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 VTI1BQ9UEU0 232 aa11.18□□□□□ -0.62
CNOT4-211ENST00000498534 ZNF223Q9UK11 482 aaPredicted RBP11.18□□□□□ -0.62
CNOT4-211ENST00000498534 INTS1Q8N201 2190 aaKnown RBP11.18□□□□□ -0.62
CNOT4-211ENST00000498534 NKX2-6A6NCS4 301 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 OR14I1A6ND48 311 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 NCF1BA6NI72 391 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-211ENST00000498534 FAM90A27PA6NNH2 459 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 NCF1CA8MVU1 366 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-211ENST00000498534 WWP2O00308 870 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 BCKDKO14874 412 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 TOXO94900 526 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 OR6B1O95007 311 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 NCF1P14598 390 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-211ENST00000498534 CNR1P21554 472 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 SLC6A12P48065 614 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 HNRNPFP52597 415 aaKnown RBP11.17□□□□□ -0.62
CNOT4-211ENST00000498534 LIM2P55344 173 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 LAPTM5Q13571 262 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 ZNF460Q14592 562 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 TGFBIQ15582 683 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 HIST2H2ACQ16777 129 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-211ENST00000498534 C18orf21Q32NC0 220 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-211ENST00000498534 HIST2H2AA3Q6FI13 130 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 ABHD17CQ6PCB6 329 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 OPN5Q6U736 354 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 C16orf47Q6ZP98 133 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-211ENST00000498534 RTL4Q6ZR62 310 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 GK5Q6ZS86 529 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 CLNKQ7Z7G1 428 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 GPSM1Q86YR5 675 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 CCDC71Q8IV32 467 aaPredicted RBP11.17□□□□□ -0.62
CNOT4-211ENST00000498534 ANKMY2Q8IV38 441 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 CLYBLQ8N0X4 340 aa11.17□□□□□ -0.62
CNOT4-211ENST00000498534 SRFBP1Q8NEF9 429 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms