RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TNFRSF1BP20333 461 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 PCBP3P57721 371 aaKnown RBP12.43□□□□□ -0.42
GARNL3-220ENST00000496711 CXCR4P61073 352 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 SPIBQ01892 262 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 PIGFQ07326 219 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 HYAL1Q12794 435 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 ATAT1Q5SQI0 421 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 AP1ARQ63HQ0 302 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 SAXO2Q658L1 398 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 KIAA1211LQ6NV74 962 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 ADCK2Q7Z695 626 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 OR2L8Q8NGY9 312 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 OR14C36Q8NHC7 312 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 GIPC3Q8TF64 312 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 RAB2BQ8WUD1 216 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 GAB3Q8WWW8 586 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 GEMIN6Q8WXD5 167 aaKnown RBP12.43□□□□□ -0.42
GARNL3-220ENST00000496711 EZH1Q92800 747 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-220ENST00000496711 FAM131CQ96AQ9 280 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 MRPL38Q96DV4 380 aaKnown RBP12.43□□□□□ -0.42
GARNL3-220ENST00000496711 NEURL3Q96EH8 262 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 ZNF300Q96RE9 604 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-220ENST00000496711 SLAMF7Q9NQ25 335 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 LMCD1Q9NZU5 365 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 TPRKBQ9Y3C4 175 aa12.43□□□□□ -0.42
GARNL3-220ENST00000496711 HEMK1Q9Y5R4 338 aaPredicted RBP12.43□□□□□ -0.42
GARNL3-220ENST00000496711 A0A1W2PPW3 197 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 PTGES3LE9PB15 166 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 KCNJ13O60928 360 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 RNGTTO60942 597 aaKnown RBP12.42□□□□□ -0.42
GARNL3-220ENST00000496711 CLEC3AO75596 197 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 DNTTP04053 509 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 PCMT1P22061 227 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 FMO3P31513 532 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 PLA2G16P53816 162 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 HPCAP84074 193 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 PRDX1Q06830 199 aaKnown RBP12.42□□□□□ -0.42
GARNL3-220ENST00000496711 NPRL3Q12980 569 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 DCTN2Q13561 401 aaKnown RBP12.42□□□□□ -0.42
GARNL3-220ENST00000496711 MAD2L1BPQ15013 274 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-220ENST00000496711 FAM180BQ6P0A1 224 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 TSPYL5Q86VY4 417 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-220ENST00000496711 TTLQ8NG68 377 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 RPP25Q9BUL9 199 aaKnown RBP12.42□□□□□ -0.42
GARNL3-220ENST00000496711 SLC17A9Q9BYT1 436 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 CCDC90BQ9GZT6 254 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 MKRN2Q9H000 416 aaKnown RBP12.42□□□□□ -0.42
GARNL3-220ENST00000496711 BTBD1Q9H0C5 482 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 ABCG4Q9H172 646 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 XKR8Q9H6D3 395 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 SCN3BQ9NY72 215 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 DGKBQ9Y6T7 804 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 MDC1Q14676 2089 aaKnown RBP12.42□□□□□ -0.42
GARNL3-220ENST00000496711 IGKV1-8A0A0C4DH67 115 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 A0A1B0GVG6 124 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 TRBC2A0A5B9 178 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 PRR19A6NJB7 356 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 E9PQ18 207 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 TMX2-CTNND1H3BSU7 103 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 TMPRSS11DO60235 418 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 CCNA2P20248 432 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 EPHA2P29317 976 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 NTSR1P30989 418 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 FRKP42685 505 aaPredicted RBP12.42□□□□□ -0.42
GARNL3-220ENST00000496711 OR1E2P47887 323 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 ADPRHP54922 357 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 MANFP55145 182 aaKnown RBP12.42□□□□□ -0.42
GARNL3-220ENST00000496711 KRT33BQ14525 404 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 FGD3Q5JSP0 725 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 CEACAM20Q6UY09 585 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 ARMC8Q8IUR7 673 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 OR10G2Q8NGC3 310 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 OR4C15Q8NGM1 316 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 OR2A1Q8NGT9 310 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 GABRG3Q99928 467 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 DGCR6LQ9BY27 220 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 MCOLN1Q9GZU1 580 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 MVB12BQ9H7P6 319 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 FBRSQ9HAH7 460 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 MOSPD1Q9UJG1 213 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 ZNF451Q9Y4E5 1061 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 PLEKHM1Q9Y4G2 1056 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 PCDHGB1Q9Y5G3 927 aa12.42□□□□□ -0.42
GARNL3-220ENST00000496711 COL4A2P08572 1712 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 PRAMEF25A6NGN4 478 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 PDZK1P1A8MUH7 402 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 RFXAPO00287 272 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 CACNB4O00305 520 aaPredicted RBP12.41□□□□□ -0.42
GARNL3-220ENST00000496711 LCMT2O60294 686 aaKnown RBP12.41□□□□□ -0.42
GARNL3-220ENST00000496711 MAPK10P53779 464 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 CDH12P55289 794 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 PCBP4P57723 403 aaKnown RBP12.41□□□□□ -0.42
GARNL3-220ENST00000496711 TRA2BP62995 288 aaKnown RBP12.41□□□□□ -0.42
GARNL3-220ENST00000496711 SLC35A2P78381 396 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 NFATC3Q12968 1075 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 HSPB3Q12988 150 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 CLCA4Q14CN2 919 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 UAP1L1Q3KQV9 507 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 TMEM196Q5HYL7 178 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 LAIR1Q6GTX8 287 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms