RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PSD4Q8NDX1 1056 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 ASB5Q8WWX0 329 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 TMEM79Q9BSE2 394 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 TRIM31Q9BZY9 425 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 COPS7BQ9H9Q2 264 aaPredicted RBP21.61■■□□□ 1.05
COL27A1-208ENST00000494780 HPF1Q9NWY4 346 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 WWOXQ9NZC7 414 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 DAPP1Q9UN19 280 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 CSMD2Q7Z408 3487 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 POLQO75417 2590 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 F8P00451 2351 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 CCDC168Q8NDH2 2452 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 TMEM200CA6NKL6 621 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 USP27XA6NNY8 438 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 CCDC188H7C350 402 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 CTNSO60931 367 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 OR2J2O76002 312 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 CERS1P27544 350 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 BMPR2Q13873 1038 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 EFTUD2Q15029 972 aaKnown RBP eCLIP21.6■■□□□ 1.051e-8■■■■■ 36.6
COL27A1-208ENST00000494780 PAOXQ6QHF9 649 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 MEX3BQ6ZN04 569 aaKnown RBP21.6■■□□□ 1.05
COL27A1-208ENST00000494780 CLNKQ7Z7G1 428 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 GPSM1Q86YR5 675 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 ZBED8Q8IZ13 594 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 OR52N2Q8NGI0 321 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 ASB15Q8WXK1 588 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 DAZLQ92904 295 aaKnown RBP21.6■■□□□ 1.05
COL27A1-208ENST00000494780 WDR34Q96EX3 536 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 PTCD3Q96EY7 689 aaKnown RBP21.6■■□□□ 1.05
COL27A1-208ENST00000494780 TSPAN17Q96FV3 270 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 EFCAB11Q9BUY7 163 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 TP63Q9H3D4 680 aaPredicted RBP21.6■■□□□ 1.05
COL27A1-208ENST00000494780 MYOTQ9UBF9 498 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 ZNF490Q9ULM2 529 aaPredicted RBP21.6■■□□□ 1.05
COL27A1-208ENST00000494780 HRH3Q9Y5N1 445 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 CLCA3PQ9Y6N3 262 aa21.6■■□□□ 1.05
COL27A1-208ENST00000494780 EFCAB8A8MWE9 144 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 STK16O75716 305 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 IFNA16P05015 189 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 TGM3Q08188 693 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 XKR6Q5GH73 641 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 SULT1C3Q6IMI6 304 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 DCHS2Q6V1P9 2916 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 HSDL2Q6YN16 418 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 C16orf47Q6ZP98 133 aaPredicted RBP21.59■■□□□ 1.05
COL27A1-208ENST00000494780 CEP128Q6ZU80 1094 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 MARVELD2Q8N4S9 558 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 MORN4Q8NDC4 146 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 KIAA1191Q96A73 305 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 CSF3RQ99062 836 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 MCCC2Q9HCC0 563 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 SMYD2Q9NRG4 433 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 DEPPQ9NTK1 212 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 VTI1BQ9UEU0 232 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 ITGB1BP2Q9UKP3 347 aa21.59■■□□□ 1.05
COL27A1-208ENST00000494780 MTO1Q9Y2Z2 717 aaKnown RBP21.59■■□□□ 1.05
COL27A1-208ENST00000494780 PRAMEF4O60810 478 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 PDE9AO76083 593 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 CCDC166P0CW27 439 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 KRTAP10-9P60411 292 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 ATP6V0D1P61421 351 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 TLE4Q04727 773 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 DOC2AQ14183 400 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 PRAMEF9Q5VWM5 478 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 ADNP2Q6IQ32 1131 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 RGS9BPQ6ZS82 235 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 SPATA6LQ8N4H0 392 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 SNX31Q8N9S9 440 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 OR14A16Q8NHC5 309 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 PTPMT1Q8WUK0 201 aaPredicted RBP21.58■■□□□ 1.05
COL27A1-208ENST00000494780 RASL10BQ96S79 203 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 ROGDIQ9GZN7 287 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 DEFB127Q9H1M4 99 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 CAB39LQ9H9S4 337 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 LIN28AQ9H9Z2 209 aaKnown RBP21.58■■□□□ 1.05
COL27A1-208ENST00000494780 PRDM7Q9NQW5 492 aa21.58■■□□□ 1.05
COL27A1-208ENST00000494780 ACOT7O00154 380 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 FANCGO15287 622 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 OR6B1O95007 311 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 CD1DP15813 335 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 CHRNB4P30926 498 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 SOX3P41225 446 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 RPL21P46778 160 aaKnown RBP21.57■■□□□ 1.04
COL27A1-208ENST00000494780 KCNC1P48547 511 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 HSPA7P48741 367 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 PPIAP62937 165 aaKnown RBP21.57■■□□□ 1.04
COL27A1-208ENST00000494780 PLGLB1Q02325 96 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 STX4Q12846 297 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 LAPTM5Q13571 262 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 PDK4Q16654 411 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 HIST2H2ACQ16777 129 aaPredicted RBP21.57■■□□□ 1.04
COL27A1-208ENST00000494780 PAGE2BQ5JRK9 111 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 HIST2H2AA3Q6FI13 130 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 IL20RBQ6UXL0 311 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 BBOF1Q8ND07 529 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 SRFBP1Q8NEF9 429 aaKnown RBP21.57■■□□□ 1.04
COL27A1-208ENST00000494780 OR2M7Q8NG81 312 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 OR8K3Q8NH51 312 aa21.57■■□□□ 1.04
COL27A1-208ENST00000494780 LILRB4Q8NHJ6 448 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms