RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 MXD1Q05195 221 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 MBTPS1Q14703 1052 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 PRSS53Q2L4Q9 553 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 ZNF628Q5EBL2 1059 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 C12orf73Q69YU5 71 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 CEACAM20Q6UY09 585 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 C1orf52Q8N6N3 182 aaKnown RBP14.68□□□□□ -0.06
SDF4-207ENST00000494748 GDPD1Q8N9F7 314 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.68□□□□□ -0.06
SDF4-207ENST00000494748 ZIC5Q96T25 663 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 TMEM38AQ9H6F2 299 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 ZNF556Q9HAH1 456 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 C11orf16Q9NQ32 467 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 NDRG2Q9UN36 371 aaKnown RBP14.68□□□□□ -0.06
SDF4-207ENST00000494748 NUP210Q8TEM1 1887 aaPredicted RBP14.68□□□□□ -0.06
SDF4-207ENST00000494748 NPIPB15A6NHN6 443 aaPredicted RBP14.68□□□□□ -0.06
SDF4-207ENST00000494748 AGRPO00253 132 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 CDRT1O95170 752 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 GADD45GO95257 159 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 CPN2P22792 545 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 ERP29P30040 261 aaKnown RBP14.68□□□□□ -0.06
SDF4-207ENST00000494748 IRS1P35568 1242 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 LIM2P55344 173 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 AP1S1P61966 158 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 ZNF33BQ06732 778 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 PUM1Q14671 1186 aaKnown RBP eCLIP14.68□□□□□ -0.068e-18■■■■■ 26.9
SDF4-207ENST00000494748 MEDAGQ5VYS4 303 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 SUN5Q8TC36 379 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 TMEM80Q96HE8 168 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 SAMD11Q96NU1 681 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 ZDHHC3Q9NYG2 299 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 ZNF282Q9UDV7 671 aaPredicted RBP14.68□□□□□ -0.06
SDF4-207ENST00000494748 ENPP4Q9Y6X5 453 aa14.68□□□□□ -0.06
SDF4-207ENST00000494748 TRBV4-1A0A0J9YWV2 114 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ZNF840PA6NDX5 716 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 UGDHO60701 494 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 KLHL18O94889 574 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 IL1AP01583 271 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 PSMA1P25786 263 aaKnown RBP14.67□□□□□ -0.06
SDF4-207ENST00000494748 MLLT11Q13015 90 aaPredicted RBP14.67□□□□□ -0.06
SDF4-207ENST00000494748 TARDBPQ13148 414 aaKnown RBP eCLIP14.67□□□□□ -0.06
SDF4-207ENST00000494748 NCF4Q15080 339 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ATP13A5Q4VNC0 1218 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 MPPE1Q53F39 396 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 SYCE2Q6PIF2 218 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 CLDN22Q8N7P3 220 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 OR5H6Q8NGV6 325 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 GEMIN6Q8WXD5 167 aaKnown RBP14.67□□□□□ -0.06
SDF4-207ENST00000494748 PLD4Q96BZ4 506 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 VPS35Q96QK1 796 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ACSL6Q9UKU0 697 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 OBSL1O75147 1896 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 HEPACAM2A8MVW5 462 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ZNF821O75541 412 aaPredicted RBP14.67□□□□□ -0.06
SDF4-207ENST00000494748 ZNF8P17098 575 aaPredicted RBP14.67□□□□□ -0.06
SDF4-207ENST00000494748 FCHO2Q0JRZ9 810 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 HNRNPA0Q13151 305 aaKnown RBP14.67□□□□□ -0.06
SDF4-207ENST00000494748 DOC2AQ14183 400 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 SEC23BQ15437 767 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 GPR19Q15760 415 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 TRIM71Q2Q1W2 868 aaKnown RBP14.67□□□□□ -0.06
SDF4-207ENST00000494748 GCNT6Q5T4J0 391 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 LIPKQ5VXJ0 399 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 SLC34A3Q8N130 599 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 UBE2J2Q8N2K1 259 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 FAM109AQ8N4B1 249 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ZNF557Q8N988 423 aaPredicted RBP14.67□□□□□ -0.06
SDF4-207ENST00000494748 OR52N2Q8NGI0 321 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ZC3HAV1LQ96H79 300 aaKnown RBP14.67□□□□□ -0.06
SDF4-207ENST00000494748 RACGAP1Q9H0H5 632 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ALG5Q9Y673 324 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 TLR4O00206 839 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 LRRTM2O43300 516 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 TP53P04637 393 aaPredicted RBP14.67□□□□□ -0.06
SDF4-207ENST00000494748 ZNF30P17039 623 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ZNF91Q05481 1191 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ACSM2AQ08AH3 577 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 HSPA14Q0VDF9 509 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 TATDN3Q17R31 274 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ACSM2BQ68CK6 577 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 TRAF7Q6Q0C0 670 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 GLB1LQ6UWU2 654 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 ZNF783Q6ZMS7 281 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 TMC8Q8IU68 726 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 PEX5LQ8IYB4 626 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 OR4K1Q8NGD4 311 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 UBASH3BQ8TF42 649 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 KLHL6Q8WZ60 621 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 OR4K3Q96R72 315 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 MND1Q9BWT6 205 aa14.67□□□□□ -0.06
SDF4-207ENST00000494748 GOLGA4Q13439 2230 aaKnown RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 CASP8AP2Q9UKL3 1982 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 FABP12A6NFH5 140 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 DUSP11O75319 330 aaKnown RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 C1QBP02746 253 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 ANXA4P09525 319 aaPredicted RBP14.66□□□□□ -0.06
SDF4-207ENST00000494748 CCNYL3P0C7X3 344 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 MPC1LP0DKB6 136 aa14.66□□□□□ -0.06
SDF4-207ENST00000494748 PKLRP30613 574 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms