RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SPPL2BQ8TCT7 592 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CHURC1Q8WUH1 139 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 FUBP1Q96AE4 644 aaKnown RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF669Q96BR6 464 aaPredicted RBP6.6□□□□□ -1.35
VPS13B-205ENST00000493587 C14orf144Q96I85 54 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 EGFL8Q99944 293 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 MYOCQ99972 504 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 REG4Q9BYZ8 158 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 HAPLN2Q9GZV7 340 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 ACTR8Q9H981 624 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 C3orf14Q9HBI5 128 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 DZANK1Q9NVP4 752 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 SMPD4Q9NXE4 827 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 NKIRAS2Q9NYR9 191 aa6.6□□□□□ -1.35
VPS13B-205ENST00000493587 CASP8AP2Q9UKL3 1982 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 UBA6A0AVT1 1052 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 OR6C68A6NDL8 312 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 TUBAL3A6NHL2 446 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 A8MXK9 166 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SPATA31C2B4DYI2 1134 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 APOC4-APOC2K7ER74 178 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 PHYHO14832 338 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 TULP3O75386 442 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 DDNO94850 711 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 APOC2P02655 101 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 CD2P06729 351 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 MGAT1P26572 445 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 S100A2P29034 98 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 RYKP34925 604 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 PPM1AP35813 382 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 CDKN2CP42773 168 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 RGS6P49758 472 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 CBLBQ13191 982 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 PGM5Q15124 567 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SGO1Q5FBB7 561 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 MANEAQ5SRI9 462 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 FAM109BQ6ICB4 259 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 FBXO46Q6PJ61 603 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 CLEC9AQ6UXN8 241 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 DEF8Q6ZN54 512 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 NANOGP1Q8N7R0 232 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 BEST4Q8NFU0 473 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 OR14A16Q8NHC5 309 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 APOL2Q9BQE5 337 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 CBWD1Q9BRT8 395 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SOX7Q9BT81 388 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 ADAT1Q9BUB4 502 aaKnown RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 EDEM2Q9BV94 578 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SPATA5L1Q9BVQ7 753 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 NXF2Q9GZY0 626 aaKnown RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 KCNH6Q9H252 994 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 PRO1933Q9H354 126 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SUV39H2Q9H5I1 410 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 POMKQ9H5K3 350 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 FAM212BQ9NTI7 297 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 PTTG3PQ9NZH4 202 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SARDHQ9UL12 918 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 NDRG2Q9UN36 371 aaKnown RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 CNTN6Q9UQ52 1028 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 RUVBL1Q9Y265 456 aaKnown RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 V9GYH0 126 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 A0A0A0MRY4 1105 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 ANXA2P2A6NMY6 339 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 MPTX1A8MV57 137 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 TSTD3H0UI37 97 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 GPX5O75715 221 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 EDN1P05305 212 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 UNGP13051 313 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 RAC2P15153 192 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 POU3F2P20265 443 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 OMPP47874 163 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 RBP2P50120 134 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 PPT1P50897 306 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 CCR6P51684 374 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 GPR143P51810 404 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 OAZ1P54368 228 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 CLDN20P56880 219 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 OR4D2P58180 307 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 ACTR1AP61163 376 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 HNRNPKP61978 463 aaKnown RBP eCLIP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 HNRNPA0Q13151 305 aaKnown RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 PIGHQ14442 188 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SAPCD1Q5SSQ6 148 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 CLEC6AQ6EIG7 209 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SLC30A6Q6NXT4 461 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 RPS27LQ71UM5 84 aaKnown RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SVBPQ8N300 66 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 ZNF511Q8NB15 262 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 ADAMTS19Q8TE59 1207 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 GCDHQ92947 438 aaPredicted RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 EXT2Q93063 718 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 UBE2FQ969M7 185 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SPACA7Q96KW9 195 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 SYT17Q9BSW7 474 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 WDR11Q9BZH6 1224 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 EML4Q9HC35 981 aaKnown RBP6.59□□□□□ -1.35
VPS13B-205ENST00000493587 EMC7Q9NPA0 242 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 ZFP64Q9NPA5 681 aa6.59□□□□□ -1.35
VPS13B-205ENST00000493587 C11orf16Q9NQ32 467 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms