RNA–Protein interactions for RNA: ENST00000493335.5

SMTN-219, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-219ENST00000493335 CASP12Q6UXS9 341 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 DEF8Q6ZN54 512 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 SLC24A5Q71RS6 500 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 WDR53Q7Z5U6 358 aaPredicted RBP14.15□□□□□ -0.14
SMTN-219ENST00000493335 LILRA3Q8N6C8 439 aaPredicted RBP14.15□□□□□ -0.14
SMTN-219ENST00000493335 C7orf57Q8NEG2 295 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 OR8J2Q8NGG1 315 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 C9orf43Q8TAL5 461 aaPredicted RBP14.15□□□□□ -0.14
SMTN-219ENST00000493335 TRPM5Q9NZQ8 1165 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 MKI67P46013 3256 aaKnown RBP14.15□□□□□ -0.14
SMTN-219ENST00000493335 PTPRDP23468 1912 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 HMX3A6NHT5 357 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 TMEM88BA6NKF7 163 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 OR6C75A6NL08 312 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 RFXAPO00287 272 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 TNFRSF21O75509 655 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 NAGAP17050 411 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 GABRB1P18505 474 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 DSC1Q08554 894 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 DUSP7Q16829 419 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 POM121L1PQ3SYA9 428 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 PRR23CQ6ZRP0 262 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 THOC6Q86W42 341 aaKnown RBP14.15□□□□□ -0.14
SMTN-219ENST00000493335 LSRQ86X29 649 aaPredicted RBP14.15□□□□□ -0.14
SMTN-219ENST00000493335 CCDC28AQ8IWP9 274 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 ATP6V1C2Q8NEY4 427 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 SLC12A9Q9BXP2 914 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 LINC00597Q9H2U6 94 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 GPATCH2Q9NW75 528 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 ZDHHC3Q9NYG2 299 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 PCDHGB2Q9Y5G2 931 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 PATJQ8NI35 1801 aa14.15□□□□□ -0.14
SMTN-219ENST00000493335 TRBV4-1A0A0J9YWV2 114 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 ARHGEF9O43307 516 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 TLX2O43763 284 aaPredicted RBP14.14□□□□□ -0.15
SMTN-219ENST00000493335 UGT2B17O75795 530 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 CTRB1P17538 263 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 PTPN5P54829 565 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 PFN3P60673 137 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 SLC5A12Q1EHB4 618 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 CTRB2Q6GPI1 263 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 FUT10Q6P4F1 479 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 YIPF7Q8N8F6 280 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 C19orf18Q8NEA5 215 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 HUS1BQ8NHY5 278 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 RASSF5Q8WWW0 418 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 SLC22A12Q96S37 553 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 SRRQ9GZT4 340 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 OR51B5Q9H339 312 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 ACER3Q9NUN7 267 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 SNX11Q9Y5W9 270 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 SPIN1Q9Y657 262 aaPredicted RBP14.14□□□□□ -0.15
SMTN-219ENST00000493335 C12orf71A8MTZ7 269 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 B8ZZF3 427 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 SYN3O14994 580 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 SDC2P34741 201 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 GPC1P35052 558 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 PCGF2P35227 344 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 PSPHP78330 225 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 C1DQ13901 141 aaKnown RBP14.14□□□□□ -0.15
SMTN-219ENST00000493335 CRTC1Q6UUV9 634 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 USP50Q70EL3 339 aaPredicted RBP14.14□□□□□ -0.15
SMTN-219ENST00000493335 SHFQ7M4L6 423 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 C2orf73Q8N5S3 287 aaPredicted RBP14.14□□□□□ -0.15
SMTN-219ENST00000493335 L3MBTL4Q8NA19 623 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 OR5H6Q8NGV6 325 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 ASB11Q8WXH4 323 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 KLHL6Q8WZ60 621 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 TRIM63Q969Q1 353 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 SAMD11Q96NU1 681 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 ZIC5Q96T25 663 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 RAD9AQ99638 391 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 SMAD5Q99717 465 aaKnown RBP14.14□□□□□ -0.15
SMTN-219ENST00000493335 PIP5K1AQ99755 562 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 ZDHHC6Q9H6R6 413 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 COQ3Q9NZJ6 369 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 NLKQ9UBE8 527 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 TMCC3Q9ULS5 477 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 HSPB11Q9Y547 144 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 TMEM202A6NGA9 273 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 IFNW1P05000 195 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 POLR2CP19387 275 aaPredicted RBP14.14□□□□□ -0.15
SMTN-219ENST00000493335 APEX1P27695 318 aaKnown RBP14.14□□□□□ -0.15
SMTN-219ENST00000493335 BDKRB1P46663 353 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 C2orf80Q0P641 193 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 C5orf22Q49AR2 442 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 TRIQKQ629K1 86 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 KIAA1841Q6NSI8 718 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 RETSATQ6NUM9 610 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 TRIM69Q86WT6 500 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 MMP21Q8N119 569 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 FAM46DQ8NEK8 389 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 TM9SF2Q99805 663 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 ZNF717Q9BY31 904 aaPredicted RBP14.14□□□□□ -0.15
SMTN-219ENST00000493335 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.14□□□□□ -0.15
SMTN-219ENST00000493335 STMN3Q9NZ72 180 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 NPAP1Q9NZP6 1156 aa14.14□□□□□ -0.15
SMTN-219ENST00000493335 A0A1W2PQ72 361 aa14.13□□□□□ -0.15
SMTN-219ENST00000493335 B4DXG7 233 aa14.13□□□□□ -0.15
SMTN-219ENST00000493335 PSIP1O75475 530 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms