RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 CLDN16Q9Y5I7 305 aa14.02□□□□□ -0.17
TOM1-215ENST00000491987 NBPF19A0A087WUL8 3843 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 TRBV11-1A0A0K0K1C0 115 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 MYOCOSA0A1B0GUC4 107 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 SAP18O00422 153 aaKnown RBP14.01□□□□□ -0.17
TOM1-215ENST00000491987 NEURL1O76050 574 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 UNC5CO95185 931 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 KLHL2O95198 593 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 CD46P15529 392 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 EEF1DP29692 281 aaKnown RBP14.01□□□□□ -0.17
TOM1-215ENST00000491987 ALDH18A1P54886 795 aaKnown RBP14.01□□□□□ -0.17
TOM1-215ENST00000491987 MLF1P58340 268 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 RCN2Q14257 317 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 TECRLQ5HYJ1 363 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 C1QL3Q5VWW1 255 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 PLD6Q8N2A8 252 aaKnown RBP14.01□□□□□ -0.17
TOM1-215ENST00000491987 ACOT4Q8N9L9 421 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 APCDD1LQ8NCL9 501 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 SRFBP1Q8NEF9 429 aaKnown RBP14.01□□□□□ -0.17
TOM1-215ENST00000491987 B3GNT7Q8NFL0 401 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 UHMK1Q8TAS1 419 aaKnown RBP14.01□□□□□ -0.17
TOM1-215ENST00000491987 THAP3Q8WTV1 239 aaPredicted RBP14.01□□□□□ -0.17
TOM1-215ENST00000491987 SLC44A1Q8WWI5 657 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 SCMH1Q96GD3 660 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 GPR78Q96P69 363 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 TBCDQ9BTW9 1192 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 ROGDIQ9GZN7 287 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 ZNF358Q9NW07 568 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 LRFN1Q9P244 771 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 SEC14L3Q9UDX4 400 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 PCDHGB6Q9Y5F9 930 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 CNTRLQ7Z7A1 2325 aa14.01□□□□□ -0.17
TOM1-215ENST00000491987 HIVEP3Q5T1R4 2406 aa14□□□□□ -0.17
TOM1-215ENST00000491987 CCDC189A1A4V9 331 aa14□□□□□ -0.17
TOM1-215ENST00000491987 POC1B-GALNT4F8VUJ3 575 aa14□□□□□ -0.17
TOM1-215ENST00000491987 CYR61O00622 381 aa14□□□□□ -0.17
TOM1-215ENST00000491987 CLDN1O95832 211 aa14□□□□□ -0.17
TOM1-215ENST00000491987 SP1P08047 785 aa14□□□□□ -0.17
TOM1-215ENST00000491987 STSP08842 583 aa14□□□□□ -0.17
TOM1-215ENST00000491987 ATP5A1P25705 553 aaKnown RBP14□□□□□ -0.17
TOM1-215ENST00000491987 SERPINB1P30740 379 aa14□□□□□ -0.17
TOM1-215ENST00000491987 SSR2P43308 183 aa14□□□□□ -0.17
TOM1-215ENST00000491987 CLCN2P51788 898 aa14□□□□□ -0.17
TOM1-215ENST00000491987 PCDH1Q08174 1060 aa14□□□□□ -0.17
TOM1-215ENST00000491987 TERF2Q15554 542 aa14□□□□□ -0.17
TOM1-215ENST00000491987 TMEM35AQ53FP2 167 aa14□□□□□ -0.17
TOM1-215ENST00000491987 GLE1Q53GS7 698 aaKnown RBP14□□□□□ -0.17
TOM1-215ENST00000491987 KHDRBS2Q5VWX1 349 aaKnown RBP14□□□□□ -0.17
TOM1-215ENST00000491987 CHSY3Q70JA7 882 aa14□□□□□ -0.17
TOM1-215ENST00000491987 MAMDC2Q7Z304 686 aaPredicted RBP14□□□□□ -0.17
TOM1-215ENST00000491987 GALNTL5Q7Z4T8 443 aa14□□□□□ -0.17
TOM1-215ENST00000491987 HORMAD2Q8N7B1 307 aa14□□□□□ -0.17
TOM1-215ENST00000491987 TMEM178AQ8NBL3 297 aa14□□□□□ -0.17
TOM1-215ENST00000491987 HUS1BQ8NHY5 278 aa14□□□□□ -0.17
TOM1-215ENST00000491987 NCLNQ969V3 563 aa14□□□□□ -0.17
TOM1-215ENST00000491987 CMTM7Q96FZ5 175 aa14□□□□□ -0.17
TOM1-215ENST00000491987 VMP1Q96GC9 406 aa14□□□□□ -0.17
TOM1-215ENST00000491987 PAFAH2Q99487 392 aa14□□□□□ -0.17
TOM1-215ENST00000491987 MAPKAP1Q9BPZ7 522 aa14□□□□□ -0.17
TOM1-215ENST00000491987 SORBS1Q9BX66 1292 aaKnown RBP14□□□□□ -0.17
TOM1-215ENST00000491987 OR51B5Q9H339 312 aa14□□□□□ -0.17
TOM1-215ENST00000491987 ACTR8Q9H981 624 aa14□□□□□ -0.17
TOM1-215ENST00000491987 LYRM4Q9HD34 91 aa14□□□□□ -0.17
TOM1-215ENST00000491987 ADAP2Q9NPF8 381 aa14□□□□□ -0.17
TOM1-215ENST00000491987 ZNF223Q9UK11 482 aaPredicted RBP14□□□□□ -0.17
TOM1-215ENST00000491987 FBXW2Q9UKT8 454 aa14□□□□□ -0.17
TOM1-215ENST00000491987 IKBKGQ9Y6K9 419 aa14□□□□□ -0.17
TOM1-215ENST00000491987 UTP20O75691 2785 aaKnown RBP14□□□□□ -0.17
TOM1-215ENST00000491987 KIF2AO00139 706 aaPredicted RBP13.99□□□□□ -0.17
TOM1-215ENST00000491987 FCHO1O14526 889 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 KLK8O60259 260 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 CTNSO60931 367 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 SLC25A12O75746 678 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 WISP2O76076 250 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 SIX3O95343 332 aaPredicted RBP13.99□□□□□ -0.17
TOM1-215ENST00000491987 IFNA16P05015 189 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 HIST1H1TP22492 207 aaPredicted RBP13.99□□□□□ -0.17
TOM1-215ENST00000491987 MAGEA12P43365 314 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 SERPINB9P50453 376 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 PER3P56645 1201 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 STX4Q12846 297 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 GTF2H2Q13888 395 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 PCBP2Q15366 365 aaKnown RBP eCLIP13.99□□□□□ -0.177e-8■■■■■ 28
TOM1-215ENST00000491987 ELAVL1Q15717 326 aaKnown RBP13.99□□□□□ -0.17
TOM1-215ENST00000491987 AP5B1Q2VPB7 878 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 SLC25A25Q6KCM7 469 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 GTF2H2CQ6P1K8 395 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 TAOK1Q7L7X3 1001 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 GOLGA7Q7Z5G4 137 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.99□□□□□ -0.17
TOM1-215ENST00000491987 FJX1Q86VR8 437 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 ZNF227Q86WZ6 799 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 PTGR2Q8N8N7 351 aaPredicted RBP13.99□□□□□ -0.17
TOM1-215ENST00000491987 SREK1Q8WXA9 508 aaKnown RBP13.99□□□□□ -0.17
TOM1-215ENST00000491987 ISL2Q96A47 359 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 FRMD6Q96NE9 622 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 MTERF1Q99551 399 aaKnown RBP13.99□□□□□ -0.17
TOM1-215ENST00000491987 TSPAN10Q9H1Z9 355 aaPredicted RBP13.99□□□□□ -0.17
TOM1-215ENST00000491987 KCMF1Q9P0J7 381 aa13.99□□□□□ -0.17
TOM1-215ENST00000491987 SPACA6W5XKT8 324 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms