RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 ECHDC1Q9NTX5 307 aa2.87□□□□□ -1.95
RBM28-207ENST00000488249 DNAJC17Q9NVM6 304 aaKnown RBP2.87□□□□□ -1.95
RBM28-207ENST00000488249 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.87□□□□□ -1.95
RBM28-207ENST00000488249 GDE1Q9NZC3 331 aa2.87□□□□□ -1.95
RBM28-207ENST00000488249 SLC7A7Q9UM01 511 aa2.87□□□□□ -1.95
RBM28-207ENST00000488249 MAB21L2Q9Y586 359 aa2.87□□□□□ -1.95
RBM28-207ENST00000488249 NPHP3Q7Z494 1330 aa2.87□□□□□ -1.95
RBM28-207ENST00000488249 A0A075B6Q4 140 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 LOC102723996A0A087X1L8 192 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 A0A1B0GTQ1 180 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 C2orf92A0A1B0GVN3 265 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 HEATR9A2RTY3 570 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 SLC15A5A6NIM6 579 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 A6NL46 340 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 MAGEB17A8MXT2 336 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 HHLA1C9JL84 531 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CCDC188H7C350 402 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 SLC30A4O14863 429 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 HDAC3O15379 428 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CLDN3O15551 220 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 RRP8O43159 456 aaKnown RBP2.86□□□□□ -1.95
RBM28-207ENST00000488249 DNAJB6O75190 326 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 KLHL2O95198 593 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ZWINTO95229 277 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CSTAP01040 98 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 IL1BP01584 269 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CSF2P04141 144 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 GLAP06280 429 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CD48P09326 243 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 UQCRFS1P1P0C7P4 283 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 VPREB1P12018 145 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 VCLP18206 1134 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ADRA2CP18825 462 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ITIH1P19827 911 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CALB2P22676 271 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ACP1P24666 158 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 PCGF2P35227 344 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CAPGP40121 348 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 FRKP42685 505 aaPredicted RBP2.86□□□□□ -1.95
RBM28-207ENST00000488249 CDKN1BP46527 198 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 SMSP52788 366 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 B2MP61769 119 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 GNB1P62873 340 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 UBE2IP63279 158 aaKnown RBP2.86□□□□□ -1.95
RBM28-207ENST00000488249 SIRPAP78324 504 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 SPP2Q13103 211 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 XRCC4Q13426 336 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 NCF4Q15080 339 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 KRTAP27-1Q3LI81 207 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 KIAA1644Q3SXP7 199 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 USH1GQ495M9 461 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 BCL7AQ4VC05 210 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 GPAT3Q53EU6 434 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 GRTP1Q5TC63 336 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 HHATQ5VTY9 493 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ZNF772Q68DY9 489 aaPredicted RBP2.86□□□□□ -1.95
RBM28-207ENST00000488249 DHRS7BQ6IAN0 325 aaPredicted RBP2.86□□□□□ -1.95
RBM28-207ENST00000488249 LINGO4Q6UY18 593 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 KDM7AQ6ZMT4 941 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 WDR88Q6ZMY6 472 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 SPATA21Q7Z572 469 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ZNF410Q86VK4 478 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 TPRA1Q86W33 373 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 SERPINA12Q8IW75 414 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CFAP206Q8IYR0 622 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 BATF2Q8N1L9 274 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CPSF7Q8N684 471 aaKnown RBP2.86□□□□□ -1.95
RBM28-207ENST00000488249 CSGALNACT2Q8N6G5 542 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 UXS1Q8NBZ7 420 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 PAPD5Q8NDF8 572 aaKnown RBP2.86□□□□□ -1.95
RBM28-207ENST00000488249 BBS1Q8NFJ9 593 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 OR8J1Q8NGP2 316 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 TAS1R2Q8TE23 839 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CKAP2Q8WWK9 683 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 SGK494Q96LW2 274 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 NSMCE2Q96MF7 247 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ZNF558Q96NG5 402 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 PANX2Q96RD6 677 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 SSX3Q99909 188 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ZNF577Q9BSK1 485 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 FAM192AQ9GZU8 254 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 RAB17Q9H0T7 212 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 METTL7AQ9H8H3 244 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 RPF1Q9H9Y2 349 aaKnown RBP2.86□□□□□ -1.95
RBM28-207ENST00000488249 TUFT1Q9NNX1 390 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ACKR4Q9NPB9 350 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 NUDT15Q9NV35 164 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 PRMT7Q9NVM4 692 aaPredicted RBP2.86□□□□□ -1.95
RBM28-207ENST00000488249 BARHL2Q9NY43 387 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 HAO2Q9NYQ3 351 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 EMC3Q9P0I2 261 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 RHCGQ9UBD6 479 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 CRNNQ9UBG3 495 aaPredicted RBP2.86□□□□□ -1.95
RBM28-207ENST00000488249 CD300AQ9UGN4 299 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ATPIF1Q9UII2 106 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ATP6V1DQ9Y5K8 247 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 AP4B1Q9Y6B7 739 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 ZNF541Q9H0D2 1346 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 PARD3Q8TEW0 1356 aa2.86□□□□□ -1.95
RBM28-207ENST00000488249 KIF27Q86VH2 1401 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms