RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 LIM2P55344 173 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 RAB38P57729 211 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 FOXL2P58012 376 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 HMGCS1Q01581 520 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 CDC20Q12834 499 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 COL28A1Q2UY09 1125 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 DEFB109BQ30KR1 87 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 TUBB8Q3ZCM7 444 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 CCNYL2Q5T2Q4 361 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 FAAH2Q6GMR7 532 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 GPR155Q7Z3F1 870 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 LAPTM4BQ86VI4 370 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 ZC3H7AQ8IWR0 971 aaKnown RBP14.85□□□□□ -0.03
C9orf3-219ENST00000488186 METTL4Q8N3J2 472 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 EFCAB3Q8N7B9 438 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 OR6Y1Q8NGX8 325 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 RAB3IL1Q8TBN0 382 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 THAP4Q8WY91 577 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 CATSPER2Q96P56 530 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 IP6K3Q96PC2 410 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 MRPL1Q9BYD6 325 aaKnown RBP14.85□□□□□ -0.03
C9orf3-219ENST00000488186 LYRM4Q9HD34 91 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 TNFRSF12AQ9NP84 129 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 MED4Q9NPJ6 270 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 INTS9Q9NV88 658 aaKnown RBP14.85□□□□□ -0.03
C9orf3-219ENST00000488186 LYARQ9NX58 379 aaKnown RBP14.85□□□□□ -0.03
C9orf3-219ENST00000488186 MS4A12Q9NXJ0 267 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 ZDHHC2Q9UIJ5 367 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 PHF11Q9UIL8 331 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 POLHQ9Y253 713 aa14.85□□□□□ -0.03
C9orf3-219ENST00000488186 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-219ENST00000488186 SERTM1A2A2V5 107 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 FAM227AF5H4B4 570 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 PRMT3O60678 531 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 GUCY1B2O75343 617 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 JRKO75564 520 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 MYO1DO94832 1006 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 UMODP07911 640 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 NR1D1P20393 614 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 MMP11P24347 488 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 BSGP35613 385 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 BUD31P41223 144 aaPredicted RBP14.84□□□□□ -0.03
C9orf3-219ENST00000488186 RPL14P50914 215 aaKnown RBP14.84□□□□□ -0.03
C9orf3-219ENST00000488186 ACSM2AQ08AH3 577 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 BST1Q10588 318 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 IL10RAQ13651 578 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 SPIN4Q56A73 249 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 ATP1A1-AS1Q5TC04 95 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 FAM219BQ5XKK7 198 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 KANK2Q63ZY3 851 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 ACSM2BQ68CK6 577 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 ZNF793Q6ZN11 406 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 GPR180Q86V85 440 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 ZCCHC7Q8N3Z6 543 aaKnown RBP14.84□□□□□ -0.03
C9orf3-219ENST00000488186 ARFGAP2Q8N6H7 521 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 C1orf52Q8N6N3 182 aaKnown RBP14.84□□□□□ -0.03
C9orf3-219ENST00000488186 LSM14AQ8ND56 463 aaKnown RBP14.84□□□□□ -0.03
C9orf3-219ENST00000488186 LRRC8CQ8TDW0 803 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 NACC2Q96BF6 587 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 WBP1Q96G27 269 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 PTCHD1Q96NR3 888 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 MAPKAP1Q9BPZ7 522 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 ACPTQ9BZG2 426 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 DDX31Q9H8H2 851 aaKnown RBP14.84□□□□□ -0.03
C9orf3-219ENST00000488186 WDR41Q9HAD4 459 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 THAP1Q9NVV9 213 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 ADAM29Q9UKF5 820 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 DAPP1Q9UN19 280 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 MAN2B2Q9Y2E5 1009 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 RAP2CQ9Y3L5 183 aa14.84□□□□□ -0.03
C9orf3-219ENST00000488186 TMEM233B4DJY2 109 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 PCDH17O14917 1159 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 ALOX12BO75342 701 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 EEDO75530 441 aaKnown RBP14.83□□□□□ -0.04
C9orf3-219ENST00000488186 GBAP04062 536 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 ITGB2P05107 769 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 FAM58BPP0C7Q3 252 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 LINC00032P0C843 101 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 C8orf89P0DMQ9 161 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 MAPK12P53778 367 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 RHDQ02161 417 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 ACTN3Q08043 901 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-219ENST00000488186 COMMD6Q7Z4G1 85 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 TRIM46Q7Z4K8 759 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 FAM47BQ8NA70 645 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 TWIST2Q8WVJ9 160 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 ZNF75CPQ92670 426 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-219ENST00000488186 CCT7Q99832 543 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 VN1R1Q9GZP7 353 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 ZNF395Q9H8N7 513 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-219ENST00000488186 C19orf25Q9UFG5 118 aaPredicted RBP14.83□□□□□ -0.04
C9orf3-219ENST00000488186 DNAJC15Q9Y5T4 150 aa14.83□□□□□ -0.04
C9orf3-219ENST00000488186 GNG14A0A1W2PPG7 69 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 BLACEA4D250 179 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 SEC22BO75396 215 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 SCELO95171 688 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 CYC1P08574 325 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 ACPPP15309 386 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 RRADP55042 308 aa14.82□□□□□ -0.04
C9orf3-219ENST00000488186 SLC13A2Q13183 592 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms