RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-215ENST00000487620 BHLHE41Q9C0J9 482 aaPredicted RBP9.36□□□□□ -0.91
ZNF3-215ENST00000487620 MMP28Q9H239 520 aa9.36□□□□□ -0.91
ZNF3-215ENST00000487620 C3orf14Q9HBI5 128 aa9.36□□□□□ -0.91
ZNF3-215ENST00000487620 C1GALT1Q9NS00 363 aa9.36□□□□□ -0.91
ZNF3-215ENST00000487620 TBC1D14Q9P2M4 693 aa9.36□□□□□ -0.91
ZNF3-215ENST00000487620 FTSJ1Q9UET6 329 aa9.36□□□□□ -0.91
ZNF3-215ENST00000487620 ENOPH1Q9UHY7 261 aa9.36□□□□□ -0.91
ZNF3-215ENST00000487620 KLHL20Q9Y2M5 609 aa9.36□□□□□ -0.91
ZNF3-215ENST00000487620 PLXND1Q9Y4D7 1925 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 H3BN98 237 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 TLR4O00206 839 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 TSPAN6O43657 245 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 CSO75390 466 aaKnown RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 SEMA3DO95025 777 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 LATS1O95835 1130 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 TGFB1P01137 390 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 IFNA14P01570 189 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 IFNW1P05000 195 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 CKMP06732 381 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 CXCR2P25025 360 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 PSMA1P25786 263 aaKnown RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 IMPA1P29218 277 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 CCL23P55773 120 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 RBBP4Q09028 425 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 C2orf80Q0P641 193 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 LRRC74AQ0VAA2 488 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 ZNF79Q15937 498 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 DUSP7Q16829 419 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 COMMD6Q7Z4G1 85 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 BCDIN3DQ7Z5W3 292 aaKnown RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 ECHDC3Q96DC8 303 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 TRMT61AQ96FX7 289 aaKnown RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 TRMT2BQ96GJ1 504 aaKnown RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 ST6GAL2Q96JF0 529 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 ZNF334Q9HCZ1 680 aaPredicted RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 LSM7Q9UK45 103 aaKnown RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 MAPRE3Q9UPY8 281 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 TRAPPC4Q9Y296 219 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 GRIP1Q9Y3R0 1128 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 ENPP4Q9Y6X5 453 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 V9GYH0 126 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 TRBV4-1A0A0J9YWV2 114 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 A0A1W2PQ09 198 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 MEIOCA2RUB1 952 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 A8MVJ9 347 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 UGT2B17O75795 530 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 CHRM5P08912 532 aaPredicted RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 IL7P13232 177 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 RHCEP18577 417 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 LIMS1P48059 325 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 CYP4F8P98187 520 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 MEF2AQ02078 507 aaPredicted RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 SLAMF1Q13291 335 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 SPHARQ15513 63 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 MED27Q6P2C8 311 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 C22orf39Q6P5X5 142 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 FAM131AQ6UXB0 335 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 Q6ZVL8 140 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 GPR65Q8IYL9 337 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 UBE2J2Q8N2K1 259 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 SETD6Q8TBK2 473 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 C17orf50Q8WW18 174 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 METTL2AQ96IZ6 378 aaKnown RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 SNX18Q96RF0 628 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 TMEM246Q9BRR3 403 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 TMEM175Q9BSA9 504 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 WRAP53Q9BUR4 548 aaKnown RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 BEX2Q9BXY8 128 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 MRPL9Q9BYD2 267 aaKnown RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 POLR2J2Q9GZM3 115 aaKnown RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 OR51B5Q9H339 312 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 PLSCR3Q9NRY6 295 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 PAQR5Q9NXK6 330 aaPredicted RBP9.35□□□□□ -0.91
ZNF3-215ENST00000487620 CFAP97Q9P2B7 532 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 ANGPT4Q9Y264 503 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 TMEM98Q9Y2Y6 226 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 PCDHGB2Q9Y5G2 931 aa9.35□□□□□ -0.91
ZNF3-215ENST00000487620 NDUFB5O43674 189 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 SGTAO43765 313 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 PSIP1O75475 530 aaKnown RBP9.34□□□□□ -0.91
ZNF3-215ENST00000487620 ABLIM3O94929 683 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 SLCO2B1O94956 709 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 CATP04040 527 aaKnown RBP9.34□□□□□ -0.91
ZNF3-215ENST00000487620 CSTF2P33240 577 aaKnown RBP eCLIP9.34□□□□□ -0.91
ZNF3-215ENST00000487620 ETV3P41162 512 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 LIM2P55344 173 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 TAS2R50P59544 299 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 RPS26P62854 115 aaKnown RBP9.34□□□□□ -0.91
ZNF3-215ENST00000487620 ZNF630Q2M218 657 aaPredicted RBP9.34□□□□□ -0.91
ZNF3-215ENST00000487620 MPEG1Q2M385 716 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 TCTN1Q2MV58 587 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 CRB2Q5IJ48 1285 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 RPS26P11Q5JNZ5 115 aaPredicted RBP9.34□□□□□ -0.91
ZNF3-215ENST00000487620 LIPKQ5VXJ0 399 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 ZDHHC20Q5W0Z9 365 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 PAQR6Q6TCH4 344 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 Q6ZVU0 165 aa9.34□□□□□ -0.91
ZNF3-215ENST00000487620 CMTM8Q8IZV2 173 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms