RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 TFECO14948 347 aaPredicted RBP11.35□□□□□ -0.59
VPS16-208ENST00000487461 FANCGO15287 622 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 CTNSO60931 367 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 STK16O75716 305 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 ZFAND5O76080 213 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 PDE9AO76083 593 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 EPORP19235 508 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 TFEBP19484 476 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 PTGS2P35354 604 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 GMPRP36959 345 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 NR0B1P51843 470 aaKnown RBP11.35□□□□□ -0.59
VPS16-208ENST00000487461 MTTPP55157 894 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 GPR85P60893 370 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 BMPR2Q13873 1038 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 DOC2AQ14183 400 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 CMPK2Q5EBM0 449 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 CDKL4Q5MAI5 379 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 SULT1C3Q6IMI6 304 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 TRIM40Q6P9F5 258 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 UBE3DQ7Z6J8 389 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 CYP4Z2PQ8N1L4 340 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 TCAIMQ8N3R3 496 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 SNX31Q8N9S9 440 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 ZFP62Q8NB50 900 aaPredicted RBP11.35□□□□□ -0.59
VPS16-208ENST00000487461 OR52N2Q8NGI0 321 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 FAM57AQ8TBR7 257 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 PTPMT1Q8WUK0 201 aaPredicted RBP11.35□□□□□ -0.59
VPS16-208ENST00000487461 SREK1Q8WXA9 508 aaKnown RBP11.35□□□□□ -0.59
VPS16-208ENST00000487461 WDR34Q96EX3 536 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 TSPAN17Q96FV3 270 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 CCDC77Q9BR77 488 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 ALOXE3Q9BYJ1 711 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 SAYSD1Q9NPB0 183 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 ADAP2Q9NPF8 381 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 DEPPQ9NTK1 212 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 KCMF1Q9P0J7 381 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 DAPP1Q9UN19 280 aa11.35□□□□□ -0.59
VPS16-208ENST00000487461 YARS2Q9Y2Z4 477 aaKnown RBP11.35□□□□□ -0.59
VPS16-208ENST00000487461 A0A088AWK7 358 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 PINLYPA6NC86 204 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 CDC40O60508 579 aaKnown RBP eCLIP11.34□□□□□ -0.59
VPS16-208ENST00000487461 OR2J2O76002 312 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 C1QAP02745 245 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 IFNA16P05015 189 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 ZNF10P21506 573 aaPredicted RBP11.34□□□□□ -0.59
VPS16-208ENST00000487461 SSR4P51571 173 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 ATP6V0D1P61421 351 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 ILF2Q12905 390 aaKnown RBP11.34□□□□□ -0.59
VPS16-208ENST00000487461 ELAVL1Q15717 326 aaKnown RBP11.34□□□□□ -0.59
VPS16-208ENST00000487461 PDK4Q16654 411 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 C3orf62Q6ZUJ4 267 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 CYS1Q717R9 158 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 TMEM132CQ8N3T6 1108 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 MARVELD2Q8N4S9 558 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 ZNF321PQ8N8H1 164 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 BBOF1Q8ND07 529 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 KIAA1191Q96A73 305 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 SDCCAG3Q96C92 435 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 PTCD3Q96EY7 689 aaKnown RBP11.34□□□□□ -0.59
VPS16-208ENST00000487461 UBXN10Q96LJ8 280 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 GPR22Q99680 433 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 RBBP8Q99708 897 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 CPNE1Q99829 537 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 ERP44Q9BS26 406 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 DEFB127Q9H1M4 99 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 DPH5Q9H2P9 285 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 CNOT10Q9H9A5 744 aaKnown RBP11.34□□□□□ -0.59
VPS16-208ENST00000487461 TIMMDC1Q9NPL8 285 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 CD274Q9NZQ7 290 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 WHRNQ9P202 907 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 MYOTQ9UBF9 498 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 RNF14Q9UBS8 474 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 VTI1BQ9UEU0 232 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 PPT2Q9UMR5 302 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 MRPS33Q9Y291 106 aaKnown RBP11.34□□□□□ -0.59
VPS16-208ENST00000487461 CLCA3PQ9Y6N3 262 aa11.34□□□□□ -0.59
VPS16-208ENST00000487461 TCRBV9S1A1TA0A576 114 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 FAM187AA6NFU0 413 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 FAM159BA6NKW6 160 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 A8MVJ9 347 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 WWP2O00308 870 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 EIF3HO15372 352 aaKnown RBP eCLIP11.33□□□□□ -0.6
VPS16-208ENST00000487461 CCNT2O60583 730 aaKnown RBP11.33□□□□□ -0.6
VPS16-208ENST00000487461 FAM155BO75949 473 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 OR6B1O95007 311 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 TPOP07202 933 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 STMN1P16949 149 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 HPDP32754 393 aaPredicted RBP11.33□□□□□ -0.6
VPS16-208ENST00000487461 GP5P40197 560 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 CASP2P42575 452 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 GPX6P59796 221 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 KRTAP10-9P60411 292 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 IRF8Q02556 426 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 DLG1Q12959 904 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 CHIT1Q13231 466 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 LAPTM5Q13571 262 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 EFTUD2Q15029 972 aaKnown RBP eCLIP11.33□□□□□ -0.62e-6■■■□□ 14.6
VPS16-208ENST00000487461 ZKSCAN8Q15776 578 aaPredicted RBP11.33□□□□□ -0.6
VPS16-208ENST00000487461 TBCCQ15814 346 aa11.33□□□□□ -0.6
VPS16-208ENST00000487461 HIST2H2ACQ16777 129 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms