RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 POLR2LP62875 67 aaKnown RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 TNNC1P63316 161 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 TUBA4AP68366 448 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 NHLH1Q02575 133 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SPOCK1Q08629 439 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CUL3Q13618 768 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SELPLGQ14242 412 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 ELAVL3Q14576 367 aaKnown RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 DRAP1Q14919 205 aaPredicted RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 RAB11BQ15907 218 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SSX2Q16385 188 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 EXT1Q16394 746 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 PNLIPRP3Q17RR3 467 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 RGS21Q2M5E4 152 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SGSM1Q2NKQ1 1148 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 AMZ1Q400G9 498 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 Q4G0T1 1027 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SERTAD4-AS1Q5TG53 156 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 GPR157Q5UAW9 335 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 TTC23Q5W5X9 447 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 ZNF470Q6ECI4 717 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 DHRS7BQ6IAN0 325 aaPredicted RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 FBXO42Q6P3S6 717 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 B3GLCTQ6Y288 498 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 PTF1AQ7RTS3 328 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 GSTA5Q7RTV2 222 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 DCXRQ7Z4W1 244 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 PATL1Q86TB9 770 aaKnown RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 LUZP2Q86TE4 346 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CCDC25Q86WR0 208 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 VSTM4Q8IW00 320 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 FOXRED2Q8IWF2 684 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 UEVLDQ8IX04 471 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CCNYL1Q8N7R7 359 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 MAB21L3Q8N8X9 362 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 PNLDC1Q8NA58 520 aaKnown RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 FAM47BQ8NA70 645 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 MLKLQ8NB16 471 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 KIAA0895Q8NCT3 520 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SEMA6DQ8NFY4 1073 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 OR7G1Q8NGA0 311 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 OR4A16Q8NH70 328 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 ENKURQ8TC29 256 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 DTX3LQ8TDB6 740 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CAPSLQ8WWF8 208 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SMG7Q92540 1137 aaKnown RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 EMG1Q92979 244 aaKnown RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 MCHR2Q969V1 340 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 RFT1Q96AA3 541 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CDKN2AIPNLQ96HQ2 116 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 INPP4AQ96PE3 977 aaPredicted RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 TESK2Q96S53 571 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 MYADMQ96S97 322 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SIN3AQ96ST3 1273 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CCM2Q9BSQ5 444 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 H2AFJQ9BTM1 129 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 CHRDL1Q9BU40 450 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 GTPBP2Q9BX10 602 aaKnown RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 HINT2Q9BX68 163 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 C1QTNF1Q9BXJ1 281 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 NUF2Q9BZD4 464 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SEMA4CQ9C0C4 833 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 ROGDIQ9GZN7 287 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 OR52A5Q9H2C5 316 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 RIMS4Q9H426 269 aaPredicted RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 KCNK15Q9H427 330 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 DPEP3Q9H4B8 488 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 WDR76Q9H967 626 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 LRRC4Q9HBW1 653 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 ZNF160Q9HCG1 818 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 RAVER2Q9HCJ3 691 aaKnown RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 HACD3Q9P035 362 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 PSMC3IPQ9P2W1 217 aaPredicted RBP3.89□□□□□ -1.79
VPS41-212ENST00000482217 DNAJB4Q9UDY4 337 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 IL17BQ9UHF5 180 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 SIX4Q9UIU6 781 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 ATG4BQ9Y4P1 393 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 MAD1L1Q9Y6D9 718 aa3.89□□□□□ -1.79
VPS41-212ENST00000482217 A0A1B0GUH1 482 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 MANSC4A6NHS7 340 aaPredicted RBP3.88□□□□□ -1.79
VPS41-212ENST00000482217 LINC01548A6NM66 108 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 GOLGA8KD6RF30 607 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 E9PMD0 336 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 NDUFS4O43181 175 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 GPAA1O43292 621 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 KDELR3O43731 214 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 DUX1O43812 170 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 RNF8O76064 485 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 CNTN5O94779 1100 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 CCNB2O95067 398 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 CALCAP01258 141 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 MT-ND2P03891 347 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 STSP08842 583 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 ALPIP09923 528 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 RFPL3SP0C7P2 107 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 FBLP22087 321 aaKnown RBP3.88□□□□□ -1.79
VPS41-212ENST00000482217 TACR3P29371 465 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 DCTDP32321 178 aa3.88□□□□□ -1.79
VPS41-212ENST00000482217 NAA10P41227 235 aaPredicted RBP3.88□□□□□ -1.79
VPS41-212ENST00000482217 PTH2RP49190 550 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms