RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ARFIP1P53367 373 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 SRSF1Q07955 248 aaKnown RBP eCLIP11.13□□□□□ -0.63
HMGN1-213ENST00000482192 ELOAQ14241 798 aaKnown RBP11.13□□□□□ -0.63
HMGN1-213ENST00000482192 AP5B1Q2VPB7 878 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 FAM153CQ494X1 144 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 FHL5Q5TD97 284 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 FCRLBQ6BAA4 426 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 ADGRD1Q6QNK2 874 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 TIFABQ6ZNK6 161 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 LCA5Q86VQ0 697 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 BCORP1Q8N888 145 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 ACOT4Q8N9L9 421 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 L3MBTL4Q8NA19 623 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 LRRN4CLQ8ND94 238 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 FAR1Q8WVX9 515 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 PHF21BQ96EK2 531 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 CSF3RQ99062 836 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 TXLNGYQ9BZA5 131 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 NOL11Q9H8H0 719 aaKnown RBP11.13□□□□□ -0.63
HMGN1-213ENST00000482192 L2HGDHQ9H9P8 463 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 DMRT3Q9NQL9 472 aa11.13□□□□□ -0.63
HMGN1-213ENST00000482192 IQANK1A0A1B0GTG1 560 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 BLACEA4D250 179 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 ANKUB1A6NFN9 424 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 SAP18O00422 153 aaKnown RBP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 RTCAO00442 366 aaKnown RBP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 CDK2AP1O14519 115 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 CTNSO60931 367 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 SH3BGRLO75368 114 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 MYO1DO94832 1006 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 AGFG2O95081 481 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 CLDN9O95484 217 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 PTX3P26022 381 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 HNRNPFP52597 415 aaKnown RBP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 TUBA3CQ13748 450 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 SLC29A2Q14542 456 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 CPSF6Q16630 551 aaKnown RBP eCLIP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 DEPDC1Q5TB30 811 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 OR4C11Q6IEV9 310 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 TUBA3EQ6PEY2 450 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 ZNF793Q6ZN11 406 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 RPS19BP1Q86WX3 136 aaKnown RBP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 GSPT2Q8IYD1 628 aaKnown RBP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 KIF2BQ8N4N8 673 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 ST6GALNAC3Q8NDV1 305 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 TMEM52Q8NDY8 209 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 NFAM1Q8NET5 270 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 B3GNT7Q8NFL0 401 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 PRR7Q8TB68 274 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 ATP6V1E2Q96A05 226 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 RGMAQ96B86 450 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 MTERF1Q99551 399 aaKnown RBP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 NPAS2Q99743 824 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 UTP23Q9BRU9 249 aaKnown RBP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 OR51B5Q9H339 312 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 ADAP2Q9NPF8 381 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 OLAHQ9NV23 265 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 KCMF1Q9P0J7 381 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 PSMC3IPQ9P2W1 217 aaPredicted RBP11.12□□□□□ -0.63
HMGN1-213ENST00000482192 PCTPQ9UKL6 214 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 RNF11Q9Y3C5 154 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 CLDN16Q9Y5I7 305 aa11.12□□□□□ -0.63
HMGN1-213ENST00000482192 SCN3AQ9NY46 2000 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 CPAMD8Q8IZJ3 1885 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 GABRR3A8MPY1 467 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 A8MUA0 341 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 TGFBR3LH3BV60 316 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 OR7A17O14581 309 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 MAN1A2O60476 641 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 RASAL1O95294 804 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 EDN3P14138 238 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 CD96P40200 585 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 CLCN2P51788 898 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 CCNG1P51959 295 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 RPS13P62277 151 aaKnown RBP11.11□□□□□ -0.63
HMGN1-213ENST00000482192 STX4Q12846 297 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 CUL3Q13618 768 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 OR1C1Q15619 314 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 ZRSR2Q15696 482 aaKnown RBP11.11□□□□□ -0.63
HMGN1-213ENST00000482192 ELAVL1Q15717 326 aaKnown RBP11.11□□□□□ -0.63
HMGN1-213ENST00000482192 EIF2S3LQ2VIR3 472 aaKnown RBP11.11□□□□□ -0.63
HMGN1-213ENST00000482192 TEX35Q5T0J7 233 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 C10orf62Q5T681 223 aaPredicted RBP11.11□□□□□ -0.63
HMGN1-213ENST00000482192 CLNKQ7Z7G1 428 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 ZCCHC7Q8N3Z6 543 aaKnown RBP11.11□□□□□ -0.63
HMGN1-213ENST00000482192 RNF175Q8N4F7 328 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 HORMAD2Q8N7B1 307 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 C7orf57Q8NEG2 295 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 OR52B6Q8NGF0 335 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 VMP1Q96GC9 406 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 CDK15Q96Q40 435 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 MAPKAP1Q9BPZ7 522 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 SLX1AQ9BQ83 275 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 CCDC77Q9BR77 488 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 NTMT1Q9BV86 223 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 DEFB126Q9BYW3 111 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 EPB41L4BQ9H329 900 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 CDCP1Q9H5V8 836 aa11.11□□□□□ -0.63
HMGN1-213ENST00000482192 PNO1Q9NRX1 252 aaKnown RBP11.11□□□□□ -0.63
HMGN1-213ENST00000482192 MS4A12Q9NXJ0 267 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms