RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TINAGQ9UJW2 476 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 SPATA2Q9UM82 520 aa20.36■□□□□ 0.85
SDF4-206ENST00000478938 F8W810 466 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 ABCD4O14678 606 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 KCNK5O95279 499 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 DHFRP00374 187 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 TRIM23P36406 574 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 CDC42P60953 191 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 DGKKQ5KSL6 1271 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 OR13C4Q8NGS5 318 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 AP3S1Q92572 193 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 HTATIP2Q9BUP3 242 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 GPR63Q9BZJ6 419 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 ZNF408Q9H9D4 720 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 ARNT2Q9HBZ2 717 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 DLL4Q9NR61 685 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 DNAJC27Q9NZQ0 273 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 PDCD5O14737 125 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 NCR1O76036 304 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 S100A3P33764 101 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 STK19P49842 368 aaPredicted RBP20.35■□□□□ 0.85
SDF4-206ENST00000478938 RPS7P62081 194 aaKnown RBP20.35■□□□□ 0.85
SDF4-206ENST00000478938 MPEG1Q2M385 716 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 MRNIPQ6NTE8 343 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 TMEM91Q6ZNR0 172 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 RNF180Q86T96 592 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 PAQR7Q86WK9 346 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 PTOV1Q86YD1 416 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 OTUB1Q96FW1 271 aaPredicted RBP20.35■□□□□ 0.85
SDF4-206ENST00000478938 KCTD7Q96MP8 289 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 OSMRQ99650 979 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 ZNF436Q9C0F3 470 aaPredicted RBP20.35■□□□□ 0.85
SDF4-206ENST00000478938 TAS2R13Q9NYV9 303 aa20.35■□□□□ 0.85
SDF4-206ENST00000478938 TUBAL3A6NHL2 446 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 SSX5O60225 188 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 TLR5O60602 858 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 PIRTP0C851 137 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 CNR2P34972 360 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 RECQLP46063 649 aaPredicted RBP20.34■□□□□ 0.85
SDF4-206ENST00000478938 ALDH9A1P49189 494 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 EVX1P49640 407 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 GDI2P50395 445 aaKnown RBP20.34■□□□□ 0.85
SDF4-206ENST00000478938 CRYBA2P53672 197 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 CDH12P55289 794 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 DSG2Q14126 1118 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 EXOC3L2Q2M3D2 409 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 TTLL9Q3SXZ7 439 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 PDSS1Q5T2R2 415 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 MDGA1Q8NFP4 955 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 COQ8AQ8NI60 647 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 CHTF18Q8WVB6 975 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 PIH1D2Q8WWB5 315 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 SENP5Q96HI0 755 aaPredicted RBP20.34■□□□□ 0.85
SDF4-206ENST00000478938 PIP5K1AQ99755 562 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 ATP13A1Q9HD20 1204 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 SH3D21A4FU49 640 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 NMBP08949 121 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 ARF4P18085 180 aaPredicted RBP20.34■□□□□ 0.85
SDF4-206ENST00000478938 ATP12AP54707 1039 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 ZNF33AQ06730 810 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 SIRPB2Q5JXA9 342 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 CD276Q5ZPR3 534 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 NLRC3Q7RTR2 1065 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 CRYBG2Q8N1P7 616 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 BEST4Q8NFU0 473 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 OR4D10Q8NGI6 311 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 PKMYT1Q99640 499 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 SARGQ9BW04 601 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 MND1Q9BWT6 205 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 BCL2L14Q9BZR8 327 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 ZNF768Q9H5H4 540 aaKnown RBP20.34■□□□□ 0.85
SDF4-206ENST00000478938 NT5MQ9NPB1 228 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 ERVK-19Q9WJR5 959 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 SNX11Q9Y5W9 270 aa20.34■□□□□ 0.85
SDF4-206ENST00000478938 RFXANKO14593 260 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 CAPZA2P47755 286 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 RPS25P62851 125 aaKnown RBP20.33■□□□□ 0.85
SDF4-206ENST00000478938 DSC1Q08554 894 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 RBBP4Q09028 425 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 SERPINA11Q86U17 422 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 TMEM163Q8TC26 289 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 SPPL2AQ8TCT8 520 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 TM9SF4Q92544 642 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 RNF34Q969K3 372 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 SFXN2Q96NB2 322 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 SLC38A2Q96QD8 506 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 PHF11Q9UIL8 331 aa20.33■□□□□ 0.85
SDF4-206ENST00000478938 IGKV6-21A0A0C4DH24 114 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 WASH4PA8MWX3 477 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 SH3BP5O60239 455 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 LRATO95237 230 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 BCKDHAP12694 445 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 ENGP17813 658 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 BDKRB1P46663 353 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 STC1P52823 247 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 KIAA1024LP59773 190 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 DSC2Q02487 901 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 OPCMLQ14982 345 aa20.33■□□□□ 0.84
SDF4-206ENST00000478938 SIDT2Q8NBJ9 832 aaKnown RBP20.33■□□□□ 0.84
SDF4-206ENST00000478938 OR2T35Q8NGX2 323 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms