RNA–Protein interactions for RNA: ENST00000475480.5

TMEM41A-206, Transcript of transmembrane protein 41A, human

TSL 3

Gene TMEM41A, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM41A-206	ENST00000475480	ZNF441	Q8N8Z8	693 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	OR6P1	Q8NGX9	317 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	NTNG2	Q96CW9	530 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SCYL1	Q96KG9	808 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	TRIB1	Q96RU8	372 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	RASL10B	Q96S79	203 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	VAT1	Q99536	393 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	TIMP4	Q99727	224 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	HEMGN	Q9BXL5	484 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	UTP6	Q9NYH9	597 aa	Known RBP	12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	PSD3	Q9NYI0	1048 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	EFR3B	Q9Y2G0	817 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ATG4B	Q9Y4P1	393 aa		12.5	□□□□□ -0.41
TMEM41A-206	ENST00000475480	IGKV3D-11	A0A0A0MRZ8	115 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	CD8B2	A6NJW9	211 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	CCDC188	H7C350	402 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	TP73	O15350	636 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	CCL3	P10147	92 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ECHS1	P30084	290 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	IDUA	P35475	653 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ACVR1B	P36896	505 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	PAFAH1B1	P43034	410 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	GPR143	P51810	404 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	VSNL1	P62760	191 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	DEFA6	Q01524	100 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	MEF2A	Q02078	507 aa	Predicted RBP	12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	OASL	Q15646	514 aa	Known RBP	12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	RNF187	Q5TA31	235 aa	Predicted RBP	12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	CCDC181	Q5TID7	509 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	QSOX2	Q6ZRP7	698 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	DNM1P46	Q6ZS02	220 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	BTLA	Q7Z6A9	289 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ARIH2OS	Q8N7S6	290 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	C9orf106	Q8NAJ2	232 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SGMS2	Q8NHU3	365 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SREK1	Q8WXA9	508 aa	Known RBP	12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SMPDL3A	Q92484	453 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	KRT12	Q99456	494 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	FAM118B	Q9BPY3	351 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ANGPTL4	Q9BY76	406 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SHARPIN	Q9H0F6	387 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	GBA3	Q9H227	469 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ACKR4	Q9NPB9	350 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	NECTIN3	Q9NQS3	549 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SACM1L	Q9NTJ5	587 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ZNF226	Q9NYT6	803 aa		12.49	□□□□□ -0.41
TMEM41A-206	ENST00000475480	C15orf38-AP3S2	A0A0A6YYH1	394 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SNPH	O15079	494 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	TMCC2	O75069	709 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	MYO1D	O94832	1006 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	RHOXF2B	P0C7M4	288 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SRD5A1	P18405	259 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	JAK1	P23458	1154 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	PIGA	P37287	484 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	CCNF	P41002	786 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	OLR1	P78380	273 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	OCRL	Q01968	901 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	TRADD	Q15628	312 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ETFDH	Q16134	617 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	PPM1N	Q8N819	430 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SLC35B2	Q8TB61	432 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	C1orf54	Q8WWF1	131 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	NCLN	Q969V3	563 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	TM4SF19	Q96DZ7	209 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	VMP1	Q96GC9	406 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	RHOXF2	Q9BQY4	288 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	PRDM14	Q9GZV8	571 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ESRP2	Q9H6T0	727 aa	Known RBP	12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ARNT2	Q9HBZ2	717 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	MYOT	Q9UBF9	498 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	TRHDE	Q9UKU6	1024 aa		12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
TMEM41A-206	ENST00000475480	KCNE1B	A0A087WTH5	132 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	CCDC162P	A2VCL2	907 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480		A8MXE2	369 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480		H7BY64	318 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	WWP2	O00308	870 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	CHST10	O43529	356 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	LIAS	O43766	372 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ZNF354A	O60765	605 aa	Predicted RBP	12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ZFAND5	O76080	213 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	CCNDBP1	O95273	360 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480		P04436	131 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	COIL	P38432	576 aa	Predicted RBP	12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	KCNJ1	P48048	391 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	NR2C2	P49116	596 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	FNTA	P49354	379 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SLC7A5	Q01650	507 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	FAM27E3	Q08E93	113 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	DUSP8	Q13202	625 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	SPARCL1	Q14515	664 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	LIPN	Q5VXI9	398 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	WDR93	Q6P2C0	686 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	ADGRD1	Q6QNK2	874 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	PLXDC2	Q6UX71	529 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	IL17REL	Q6ZVW7	336 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	KLHL7	Q8IXQ5	586 aa		12.47	□□□□□ -0.41
TMEM41A-206	ENST00000475480	LRRC25	Q8N386	305 aa	Predicted RBP	12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms