RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 KRT15P19012 456 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 TSPAN8P19075 237 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 IMPDH1P20839 514 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 ATP5F1P24539 256 aaPredicted RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 SSR2P43308 183 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 TSFMP43897 325 aaKnown RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 RAP1GDS1P52306 607 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 HSD17B7P56937 341 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 SLC26A5P58743 744 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 HERVK_113P63132 956 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 CLCQ05315 142 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 SLC13A2Q13183 592 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 SLAMF1Q13291 335 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 CUL3Q13618 768 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 RCN2Q14257 317 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 RASA2Q15283 850 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 UNC50Q53HI1 259 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 PRR30Q53SZ7 412 aaPredicted RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 ZNF678Q5SXM1 525 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 TTC19Q6DKK2 380 aaPredicted RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 WDR93Q6P2C0 686 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 CUZD1Q86UP6 607 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 SCUBE1Q8IWY4 988 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 ZNF595Q8IYB9 648 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 IQCKQ8N0W5 287 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 CISD2Q8N5K1 135 aaKnown RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 EFCAB3Q8N7B9 438 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 OR2W6PQ8NHA6 318 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 EPS8L3Q8TE67 593 aaKnown RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 TRPC4APQ8TEL6 797 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 ZNF483Q8TF39 744 aaPredicted RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 SNRNP40Q96DI7 357 aaKnown RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 CNDP1Q96KN2 507 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 ZNF354BQ96LW1 612 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 CSF3RQ99062 836 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 CENPKQ9BS16 269 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 SORBS1Q9BX66 1292 aaKnown RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 ERVK-6Q9BXR3 956 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 LYRM4Q9HD34 91 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.58□□□□□ -1.04
SYN3-211ENST00000472027 TEKT2Q9UIF3 430 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 FBXW2Q9UKT8 454 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 MRPS33Q9Y291 106 aaKnown RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 CLDN16Q9Y5I7 305 aa8.58□□□□□ -1.04
SYN3-211ENST00000472027 V9GYY5 206 aaPredicted RBP8.58□□□□□ -1.04
SYN3-211ENST00000472027 NUP210LQ5VU65 1888 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 TLDC2A0PJX2 215 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 SAGE2PA6NJ88 616 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 TGFBR3LH3BV60 316 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 CDH16O75309 829 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 GLRA3O75311 464 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 VPS4BO75351 444 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ETHE1O95571 254 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 WDPCPO95876 746 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 OTCP00480 354 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 F10P00742 488 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 CPN2P22792 545 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 CCT5P48643 541 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ARFIP1P53367 373 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 PRKAA2P54646 552 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ARG2P78540 354 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ZNF33BQ06732 778 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 TRAF3Q13114 568 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ZNF169Q14929 603 aaPredicted RBP8.57□□□□□ -1.04
SYN3-211ENST00000472027 TLR1Q15399 786 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 MEP1AQ16819 746 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ERCC6LQ2NKX8 1250 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 GGTA1PQ4G0N0 100 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ABHD17BQ5VST6 288 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 FRG2Q64ET8 278 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 FCRLBQ6BAA4 426 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 LETMD1Q6P1Q0 360 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 CLNKQ7Z7G1 428 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ATCAYQ86WG3 371 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 CRLF3Q8IUI8 442 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 SLC22A9Q8IVM8 553 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ZCCHC7Q8N3Z6 543 aaKnown RBP8.57□□□□□ -1.04
SYN3-211ENST00000472027 NFAM1Q8NET5 270 aaPredicted RBP8.57□□□□□ -1.04
SYN3-211ENST00000472027 MYRIPQ8NFW9 859 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 OR1N1Q8NGS0 311 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ELP5Q8TE02 316 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 AENQ8WTP8 325 aaKnown RBP8.57□□□□□ -1.04
SYN3-211ENST00000472027 C19orf60Q96EN9 201 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 TMEM237Q96Q45 408 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 FRG2BQ96QU4 278 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 SERPINI1Q99574 410 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 NPAS2Q99743 824 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ZNF717Q9BY31 904 aaPredicted RBP8.57□□□□□ -1.04
SYN3-211ENST00000472027 ALOXE3Q9BYJ1 711 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 CDCP1Q9H5V8 836 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 CLMPQ9H6B4 373 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 PNO1Q9NRX1 252 aaKnown RBP8.57□□□□□ -1.04
SYN3-211ENST00000472027 MAP10Q9P2G4 905 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 ZNF225Q9UK10 706 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 EMCNQ9ULC0 261 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 GRID1Q9ULK0 1009 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 VPS4AQ9UN37 437 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 PCDHGA10Q9Y5H3 936 aa8.57□□□□□ -1.04
SYN3-211ENST00000472027 COPG1Q9Y678 874 aaKnown RBP8.57□□□□□ -1.04
SYN3-211ENST00000472027 SPACA6W5XKT8 324 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms