RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 PPM1NQ8N819 430 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 F2RL3Q96RI0 385 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 CCDC77Q9BR77 488 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 CD244Q9BZW8 370 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 RUBCNLQ9H714 662 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 ZNF223Q9UK11 482 aaPredicted RBP21.02■□□□□ 0.96
C9orf3-213ENST00000471978 DAPP1Q9UN19 280 aa21.02■□□□□ 0.96
C9orf3-213ENST00000471978 KLF13Q9Y2Y9 288 aaPredicted RBP21.02■□□□□ 0.96
C9orf3-213ENST00000471978 ENO4A6NNW6 628 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 CYR61O00622 381 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 ZNHIT1O43257 154 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 ITGA10O75578 1167 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 FAM155BO75949 473 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 ABOP16442 354 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 EPORP19235 508 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 KCNC1P48547 511 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 GPR143P51810 404 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 HSF1Q00613 529 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 IRF8Q02556 426 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 CAV1Q03135 178 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 CHIT1Q13231 466 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 RCN2Q14257 317 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 NAA30Q147X3 362 aaPredicted RBP21.01■□□□□ 0.95
C9orf3-213ENST00000471978 POGLUT1Q8NBL1 392 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 STAG3L4Q8TBR4 150 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 CSF3RQ99062 836 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 PHACTR1Q9C0D0 580 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 ALG9Q9H6U8 611 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 PRM3Q9NNZ6 103 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 ADAP2Q9NPF8 381 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 PRDM7Q9NQW5 492 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 ASB1Q9Y576 335 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 DCHS2Q6V1P9 2916 aa21.01■□□□□ 0.95
C9orf3-213ENST00000471978 PCNX1Q96RV3 2341 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 TACC2O95359 2948 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 KLRC4-KLRK1H3BQV0 150 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 TNFRSF8P28908 595 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 CASQ1P31415 396 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 MAGEA4P43358 317 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 MEOX1P50221 254 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 SMSP52788 366 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 SLMAPQ14BN4 828 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 TBCCQ15814 346 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 ZNF630Q2M218 657 aaPredicted RBP21■□□□□ 0.95
C9orf3-213ENST00000471978 LRRC70Q7Z2Q7 622 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 CMC1Q7Z7K0 106 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 SULF2Q8IWU5 870 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 MCEMP1Q8IX19 187 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 CYP4Z2PQ8N1L4 340 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 TMEM132CQ8N3T6 1108 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 FBXO25Q8TCJ0 367 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 KCNC2Q96PR1 638 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 RAB17Q9H0T7 212 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 CHST11Q9NPF2 352 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 MEMO1Q9Y316 297 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 FBN2P35556 2912 aa21■□□□□ 0.95
C9orf3-213ENST00000471978 SYNDIG1LA6NDD5 238 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 CTNSO60931 367 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 ZFAND5O76080 213 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 IFNA16P05015 189 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 SLC35E2BP0CK96 405 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 TFEBP19484 476 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 AGAP20933 346 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 STX2P32856 288 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 MSH2P43246 934 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 SSR4P51571 173 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 DLG1Q12959 904 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 BMPR2Q13873 1038 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 EFTUD2Q15029 972 aaKnown RBP eCLIP20.99■□□□□ 0.958e-8■■■□□ 19.1
C9orf3-213ENST00000471978 TRADDQ15628 312 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 ELAVL1Q15717 326 aaKnown RBP20.99■□□□□ 0.95
C9orf3-213ENST00000471978 TBC1D1Q86TI0 1168 aaPredicted RBP20.99■□□□□ 0.95
C9orf3-213ENST00000471978 ISCA2Q86U28 154 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 CHERPQ8IWX8 916 aaKnown RBP20.99■□□□□ 0.95
C9orf3-213ENST00000471978 SRFBP1Q8NEF9 429 aaKnown RBP20.99■□□□□ 0.95
C9orf3-213ENST00000471978 FBF1Q8TES7 1133 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 ROGDIQ9GZN7 287 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 NMRAL1Q9HBL8 299 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 NUDT4Q9NZJ9 180 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 YARS2Q9Y2Z4 477 aaKnown RBP20.99■□□□□ 0.95
C9orf3-213ENST00000471978 CLCA3PQ9Y6N3 262 aa20.99■□□□□ 0.95
C9orf3-213ENST00000471978 MYOCOSA0A1B0GUC4 107 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 SUPT3HB4E1H0 165 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 TFECO14948 347 aaPredicted RBP20.98■□□□□ 0.95
C9orf3-213ENST00000471978 PEX1O43933 1283 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 PRKNO60260 465 aaPredicted RBP20.98■□□□□ 0.95
C9orf3-213ENST00000471978 SUPT3HO75486 399 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 CRABP2P29373 138 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 PTGER1P34995 402 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 RFC3P40938 356 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 CASP2P42575 452 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 STX4Q12846 297 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 MDGA2Q7Z553 956 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 UBE3DQ7Z6J8 389 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 AGAP11Q8TF27 550 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 ZNF473Q8WTR7 871 aaKnown RBP20.98■□□□□ 0.95
C9orf3-213ENST00000471978 UBE2E3Q969T4 207 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 TBCDQ9BTW9 1192 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 MS4A8Q9BY19 250 aa20.98■□□□□ 0.95
C9orf3-213ENST00000471978 ALOXE3Q9BYJ1 711 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms