RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 SH3BP4Q9P0V3 963 aa14.35□□□□□ -0.11
COL4A5-203ENST00000470339 FTSJ1Q9UET6 329 aa14.35□□□□□ -0.11
COL4A5-203ENST00000470339 KLHL3Q9UH77 587 aa14.35□□□□□ -0.11
COL4A5-203ENST00000470339 PCDHGA7Q9Y5G6 932 aa14.35□□□□□ -0.11
COL4A5-203ENST00000470339 A0A0G2JN53 185 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 C1orf226A1L170 272 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 FXYD1O00168 92 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 PROM1O43490 865 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 GALR3O60755 368 aaPredicted RBP14.34□□□□□ -0.11
COL4A5-203ENST00000470339 SPTBP11277 2137 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 CERS1P27544 350 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 MC1RQ01726 317 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 TRA2AQ13595 282 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL4A5-203ENST00000470339 GRM7Q14831 915 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 FAM214AQ32MH5 1076 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 DEFB134Q4QY38 66 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 NDUFAF5Q5TEU4 345 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 YOD1Q5VVQ6 348 aaPredicted RBP14.34□□□□□ -0.11
COL4A5-203ENST00000470339 OR4F3Q6IEY1 312 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 PGM2L1Q6PCE3 622 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 BNC2Q6ZN30 1099 aaPredicted RBP14.34□□□□□ -0.11
COL4A5-203ENST00000470339 DHDDSQ86SQ9 333 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 SCUBE1Q8IWY4 988 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 FAM47BQ8NA70 645 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 ATOH1Q92858 354 aaPredicted RBP14.34□□□□□ -0.11
COL4A5-203ENST00000470339 CCDC115Q96NT0 180 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 GFM1Q96RP9 751 aaKnown RBP14.34□□□□□ -0.11
COL4A5-203ENST00000470339 EDEM2Q9BV94 578 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 ANKHQ9HCJ1 492 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 SPAG4Q9NPE6 437 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 SERHLQ9NQF3 203 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 KCMF1Q9P0J7 381 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 TMEM181Q9P2C4 612 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 SERTAD3Q9UJW9 196 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 ATXN7L1Q9ULK2 861 aaPredicted RBP14.34□□□□□ -0.11
COL4A5-203ENST00000470339 AP3M1Q9Y2T2 418 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 HCN4Q9Y3Q4 1203 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 PCDHA9Q9Y5H5 950 aa14.34□□□□□ -0.11
COL4A5-203ENST00000470339 IGHV5-10-1A0A0J9YXX1 117 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 A0A1W2PR48 441 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 HYKKA2RU49 373 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 H3BMH7 237 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 LMNAP02545 664 aaKnown RBP14.33□□□□□ -0.12
COL4A5-203ENST00000470339 ZCCHC18P0CG32 403 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 SEPHS1P49903 392 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 SPEM2Q0P670 501 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 DEFB110Q30KQ9 67 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 SNAP47Q5SQN1 464 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 TLDC1Q6P9B6 456 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 RIPOR1Q6ZS17 1223 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 TICAM1Q8IUC6 712 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 ULK2Q8IYT8 1036 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 FBXW8Q8N3Y1 598 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 TTC29Q8NA56 475 aaPredicted RBP14.33□□□□□ -0.12
COL4A5-203ENST00000470339 GOT1L1Q8NHS2 421 aaPredicted RBP14.33□□□□□ -0.12
COL4A5-203ENST00000470339 ZCCHC10Q8TBK6 192 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 PHF12Q96QT6 1004 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 CDRT15Q96T59 188 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 CGREF1Q99674 301 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 CDC6Q99741 560 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 SH3GL1Q99961 368 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 PAIP1Q9H074 479 aaKnown RBP14.33□□□□□ -0.12
COL4A5-203ENST00000470339 FANCEQ9HB96 536 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 TEX10Q9NXF1 929 aaPredicted RBP14.33□□□□□ -0.12
COL4A5-203ENST00000470339 NCDNQ9UBB6 729 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 ABCD2Q9UBJ2 740 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 PSME2Q9UL46 239 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 DAPP1Q9UN19 280 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 ATG4BQ9Y4P1 393 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 SPACA6W5XKT8 324 aa14.33□□□□□ -0.12
COL4A5-203ENST00000470339 TRBV5-3A0A0A0MS03 114 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 A8MU76 341 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 RFXANKO14593 260 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 OR2B3O76000 313 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 SLC6A2P23975 617 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 TLX1P31314 330 aaPredicted RBP14.32□□□□□ -0.12
COL4A5-203ENST00000470339 BUD31P41223 144 aaPredicted RBP14.32□□□□□ -0.12
COL4A5-203ENST00000470339 FRKP42685 505 aaPredicted RBP14.32□□□□□ -0.12
COL4A5-203ENST00000470339 LIM2P55344 173 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 ITGA1P56199 1179 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 ACY1Q03154 408 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 ILKQ13418 452 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 RUNX2Q13950 521 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 MLC1Q15049 377 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 MUM1Q2TAK8 710 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 ZNF385BQ569K4 471 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 PIGGQ5H8A4 983 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 SAMD4BQ5PRF9 694 aaKnown RBP14.32□□□□□ -0.12
COL4A5-203ENST00000470339 C6orf10Q5SRN2 563 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 ANKRD26P1Q6NSI1 321 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 DGLUCYQ7Z3D6 616 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 TMPRSS9Q7Z410 1059 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 NAXDQ8IW45 347 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 OR8J3Q8NGG0 315 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 MVB12AQ96EY5 273 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 ANKRD27Q96NW4 1050 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 MAPKAP1Q9BPZ7 522 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 IL1RL2Q9HB29 575 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 STARD5Q9NSY2 213 aa14.32□□□□□ -0.12
COL4A5-203ENST00000470339 ACSS1Q9NUB1 689 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms