RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CTAGE4Q8IX94 777 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 LMNTD2Q8IXW0 634 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 SLC25A45Q8N413 288 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 GALNT4Q8N4A0 578 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 ARL14Q8N4G2 192 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 CEP112Q8N8E3 955 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 PRELID2Q8N945 189 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 Q8N9G6 341 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-208ENST00000469585 MCUQ8NE86 351 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 OR6Y1Q8NGX8 325 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 MAGEC3Q8TD91 643 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 THAP4Q8WY91 577 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 CDKL2Q92772 493 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 N4BP2L2Q92802 583 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-208ENST00000469585 C3orf49Q96BT1 292 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 LRRC39Q96DD0 335 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 STAMBPL1Q96FJ0 436 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 COX14Q96I36 57 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 RITA1Q96K30 269 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 DNAJC1Q96KC8 554 aaKnown RBP6.03□□□□□ -1.44
PTCD3-208ENST00000469585 HS6ST2Q96MM7 605 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 KRT12Q99456 494 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 CMKLR1Q99788 373 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 CCDC3Q9BQI4 270 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 ELOVL1Q9BW60 279 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 TWSG1Q9GZX9 223 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 DDX47Q9H0S4 455 aaKnown RBP6.03□□□□□ -1.44
PTCD3-208ENST00000469585 MRM3Q9HC36 420 aaKnown RBP6.03□□□□□ -1.44
PTCD3-208ENST00000469585 EPB41L5Q9HCM4 733 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 LIN7CQ9NUP9 197 aaKnown RBP6.03□□□□□ -1.44
PTCD3-208ENST00000469585 POT1Q9NUX5 634 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 NSMCE4AQ9NXX6 385 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 KIF17Q9P2E2 1029 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 ATXN10Q9UBB4 475 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 MTRF1LQ9UGC7 380 aaKnown RBP6.03□□□□□ -1.44
PTCD3-208ENST00000469585 PCYOX1Q9UHG3 505 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 KCNK6Q9Y257 313 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 BTBD3Q9Y2F9 522 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 NEUROG3Q9Y4Z2 214 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 SLCO1B1Q9Y6L6 691 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 PCDH15Q96QU1 1955 aa6.03□□□□□ -1.44
PTCD3-208ENST00000469585 GVINP1Q7Z2Y8 2422 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 A0A0U1RQS6 177 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 EME2A4GXA9 379 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 MGAT4DA6NG13 374 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 USP27XA6NNY8 438 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 GOLGA8MH3BSY2 632 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 H7C0S8 307 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 DNALI1O14645 258 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 LIN7AO14910 233 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 RRP8O43159 456 aaKnown RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 UGT1A9O60656 530 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 MTX2O75431 263 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 POP7O75817 140 aaKnown RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 CPNE6O95741 557 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 NUDT3O95989 172 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 RPLP0P05388 317 aaKnown RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 ZSCAN5DPP0CG00 497 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 HSD3B1P14060 373 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 ETS1P14921 441 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 ZNF8P17098 575 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 PGAM1P18669 254 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 UGT1A6P19224 532 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 UGT1A1P22309 533 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 UGT1A4P22310 534 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 AK4P27144 223 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 CSTF2P33240 577 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 UGT1A3P35503 534 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 UGT1A5P35504 534 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 ACADVLP49748 655 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 CLCNKAP51800 687 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 ZNF140P52738 457 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 SLC12A2P55011 1212 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 ELLP55199 621 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-208ENST00000469585 RPA4Q13156 261 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 AMZ1Q400G9 498 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 AWAT1Q58HT5 328 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 SUMO4Q6EEV6 95 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 KDM7AQ6ZMT4 941 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 OTOAQ7RTW8 1153 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 ADGRG6Q86SQ4 1221 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 SERPINA9Q86WD7 417 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 SLC35F3Q8IY50 421 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 LAS2Q8IYD9 372 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 TTC30BQ8N4P2 665 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 CHCHD4Q8N4Q1 142 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 OR13C4Q8NGS5 318 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 OR2L2Q8NH16 312 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 HM13Q8TCT9 377 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 ASZ1Q8WWH4 475 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 CPT1BQ92523 772 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 ELMO1Q92556 727 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 SLCO2A1Q92959 643 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 SDCCAG3Q96C92 435 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 CDKN2AIPNLQ96HQ2 116 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 SCNM1Q9BWG6 230 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 TRIM31Q9BZY9 425 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 UGT1A7Q9HAW7 530 aa6.02□□□□□ -1.45
PTCD3-208ENST00000469585 UGT1A10Q9HAW8 530 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms