RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PCDHGB7Q9Y5F8 929 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 PEX16Q9Y5Y5 336 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 IRAK3Q9Y616 596 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 SAGE2PA6NJ88 616 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 CLDN25C9JDP6 229 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 LATO43561 262 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 HPRP00739 348 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 GIMD1P0DJR0 217 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 RAB14P61106 215 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 CDK3Q00526 305 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 OR52E8Q6IFG1 317 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 FAM131AQ6UXB0 335 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 NUP54Q7Z3B4 507 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 MFSD6LQ8IWD5 586 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 KLHDC8AQ8IYD2 350 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 CLECL1Q8IZS7 167 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 ANKFN1Q8N957 763 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 OR2L2Q8NH16 312 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 UFD1Q92890 307 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 NEIL2Q969S2 332 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 C3orf30Q96M34 536 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 GMEB2Q9UKD1 530 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 PPIEQ9UNP9 301 aaKnown RBP13.22□□□□□ -0.29
BRAT1-203ENST00000467558 MED31Q9Y3C7 131 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 GPR45Q9Y5Y3 372 aa13.22□□□□□ -0.29
BRAT1-203ENST00000467558 DAPL1A0PJW8 107 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 CCDC182A6NF36 153 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 SLC22A1O15245 554 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 MS4A2Q01362 244 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 COLEC12Q5KU26 742 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 OGFRL1Q5TC84 451 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-203ENST00000467558 LCTLQ6UWM7 567 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 ZNF765Q7L2R6 523 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 CARM1Q86X55 608 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 NUP43Q8NFH3 380 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 GRHL3Q8TE85 626 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 JPH3Q8WXH2 748 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-203ENST00000467558 MMABQ96EY8 250 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-203ENST00000467558 COX4I2Q96KJ9 171 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 PDE7BQ9NP56 450 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 HEBP1Q9NRV9 189 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 URB1O60287 2271 aaKnown RBP13.21□□□□□ -0.29
BRAT1-203ENST00000467558 EFCAB9A8MZ26 197 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 H3BQ06 376 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-203ENST00000467558 SOX30O94993 753 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 SNAP29O95721 258 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 CLIC3O95833 236 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 IGLV3-27P01718 113 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 THEGLP0DJG4 465 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 AHCYP23526 432 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 SDC2P34741 201 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 ZNF267Q14586 743 aaPredicted RBP13.21□□□□□ -0.29
BRAT1-203ENST00000467558 MEP1AQ16819 746 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 CSNK1A1LQ8N752 337 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.21□□□□□ -0.29
BRAT1-203ENST00000467558 HCAR2Q8TDS4 363 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 MUS81Q96NY9 551 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 MCHR1Q99705 422 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 HCN3Q9P1Z3 774 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 CNOT11Q9UKZ1 510 aaKnown RBP13.21□□□□□ -0.29
BRAT1-203ENST00000467558 PCDHB14Q9Y5E9 798 aa13.21□□□□□ -0.29
BRAT1-203ENST00000467558 BMP8BP34820 402 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 SYT16Q17RD7 645 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF542PQ5EBM4 170 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 SHQ1Q6PI26 577 aaKnown RBP13.21□□□□□ -0.3
BRAT1-203ENST00000467558 FRRS1Q6ZNA5 592 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 BMP8AQ7Z5Y6 402 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 UXS1Q8NBZ7 420 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 OR52N2Q8NGI0 321 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 OR8K5Q8NH50 307 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 CD180Q99467 661 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 FAM92AA1XBS5 289 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 ARNTLO00327 626 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 LINGO3P0C6S8 592 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 SDC1P18827 310 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 CXCR1P25024 350 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 NUDT6P53370 316 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 LRP8Q14114 963 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 CRTC2Q53ET0 693 aaPredicted RBP13.21□□□□□ -0.3
BRAT1-203ENST00000467558 LRRC25Q8N386 305 aaPredicted RBP13.21□□□□□ -0.3
BRAT1-203ENST00000467558 MARVELD2Q8N4S9 558 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 DPH2Q9BQC3 489 aaPredicted RBP13.21□□□□□ -0.3
BRAT1-203ENST00000467558 GORASP1Q9BQQ3 440 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 PRTFDC1Q9NRG1 225 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 TMEM181Q9P2C4 612 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 CKLFQ9UBR5 152 aa13.21□□□□□ -0.3
BRAT1-203ENST00000467558 COL11A2P13942 1736 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 COL4A5P29400 1685 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 WWP2O00308 870 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF821O75541 412 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 KLK3P07288 261 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 RNH1P13489 461 aaKnown RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 GALK1P51570 392 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ATP12AP54707 1039 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 HNRNPKP61978 463 aaKnown RBP eCLIP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 POU6F2P78424 691 aaPredicted RBP13.2□□□□□ -0.3
BRAT1-203ENST00000467558 HYAL2Q12891 473 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 QPRTQ15274 297 aa13.2□□□□□ -0.3
BRAT1-203ENST00000467558 ZSWIM7Q19AV6 140 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms