RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 PCDHGA6Q9Y5G7 932 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 SCN2AQ99250 2005 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 AHCTF1Q8WYP5 2266 aa14.35□□□□□ -0.11
NPHP4-205ENST00000466897 ZNF860A6NHJ4 632 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 PEX11AO75192 247 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 BMP10O95393 424 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 LBPP18428 481 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 JAK1P23458 1154 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 RPL38P63173 70 aaKnown RBP14.34□□□□□ -0.11
NPHP4-205ENST00000466897 GNGT1P63211 74 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 OCA2Q04671 838 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 ZNF763Q0D2J5 394 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 NKG7Q16617 165 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 GALNTL6Q49A17 601 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 LCN10Q6JVE6 187 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 IKBIPQ70UQ0 350 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 GPR180Q86V85 440 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 ZNF248Q8NDW4 579 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 OR5T3Q8NGG3 340 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 CEP70Q8NHQ1 597 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.34□□□□□ -0.11
NPHP4-205ENST00000466897 CT55Q8WUE5 264 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 TBC1D20Q96BZ9 403 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 CCDC28BQ9BUN5 200 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 EFHD1Q9BUP0 239 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 CCDC86Q9H6F5 360 aaKnown RBP14.34□□□□□ -0.11
NPHP4-205ENST00000466897 AKIRIN1Q9H9L7 192 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-205ENST00000466897 NOP53Q9NZM5 478 aaKnown RBP14.34□□□□□ -0.11
NPHP4-205ENST00000466897 HCN3Q9P1Z3 774 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 GPN3Q9UHW5 284 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-205ENST00000466897 PADI2Q9Y2J8 665 aa14.34□□□□□ -0.11
NPHP4-205ENST00000466897 GMNCA6NCL1 334 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 SYNDIG1LA6NDD5 238 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 PSMD12O00232 456 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-205ENST00000466897 CYR61O00622 381 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 PROM1O43490 865 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 SHOX2O60902 331 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-205ENST00000466897 ANXA4P09525 319 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-205ENST00000466897 PRPS2P11908 318 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 SDC1P18827 310 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 EPHA3P29320 983 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 BUD31P41223 144 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-205ENST00000466897 XCR1P46094 333 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 IDH3AP50213 366 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 AQP5P55064 265 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 HNRNPH2P55795 449 aaKnown RBP14.33□□□□□ -0.12
NPHP4-205ENST00000466897 OLR1P78380 273 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 IRX1P78414 480 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-205ENST00000466897 MAT1AQ00266 395 aaKnown RBP14.33□□□□□ -0.12
NPHP4-205ENST00000466897 TNFRSF17Q02223 184 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 SLC9B1Q4ZJI4 515 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 VWA5B1Q5TIE3 1220 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 CGB2Q6NT52 195 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 ACAD11Q709F0 780 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 SPATA19Q7Z5L4 167 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 ZC3H7AQ8IWR0 971 aaKnown RBP14.33□□□□□ -0.12
NPHP4-205ENST00000466897 FAM9CQ8IZT9 166 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 IL22RA1Q8N6P7 574 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 FNDC5Q8NAU1 212 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 C7orf57Q8NEG2 295 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 STT3BQ8TCJ2 826 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 SPSB2Q99619 263 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 MAPKAP1Q9BPZ7 522 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 DPH1Q9BZG8 443 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 NPHS2Q9NP85 383 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 MYNNQ9NPC7 610 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 KLHL14Q9P2G3 628 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 CTSFQ9UBX1 484 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 KCND3Q9UK17 655 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 CROTQ9UKG9 612 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 ADAM21Q9UKJ8 722 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 EIF3LQ9Y262 564 aaKnown RBP14.33□□□□□ -0.12
NPHP4-205ENST00000466897 MRPS33Q9Y291 106 aaKnown RBP14.33□□□□□ -0.12
NPHP4-205ENST00000466897 FREM2Q5SZK8 3169 aa14.33□□□□□ -0.12
NPHP4-205ENST00000466897 CROCCQ5TZA2 2017 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 GNG14A0A1W2PPG7 69 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 PCDH17O14917 1159 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 DIAPH2O60879 1101 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 DNAJB6O75190 326 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 KLF7O75840 302 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-205ENST00000466897 RECKO95980 971 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 GBAP04062 536 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 FHP07954 510 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 ZGLP1P0C6A0 271 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 NR2F6P10588 404 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 BCKDHAP12694 445 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 TCN2P20062 427 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 TLX1P31314 330 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-205ENST00000466897 ASMTP46597 345 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 RPS15P62841 145 aaKnown RBP14.32□□□□□ -0.12
NPHP4-205ENST00000466897 CLN3Q13286 438 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 DNASE1L3Q13609 305 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 HEPACAMQ14CZ8 416 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 SYT16Q17RD7 645 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 FAM199XQ6PEV8 388 aaPredicted RBP14.32□□□□□ -0.12
NPHP4-205ENST00000466897 QSOX2Q6ZRP7 698 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 CLNKQ7Z7G1 428 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 ZNF595Q8IYB9 648 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 OR2Y1Q8NGV0 311 aa14.32□□□□□ -0.12
NPHP4-205ENST00000466897 C16orf78Q8WTQ4 265 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms