RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 RNF186Q9NXI6 227 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 DNAJC27Q9NZQ0 273 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 NUFIP1Q9UHK0 495 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 ATP6V1HQ9UI12 483 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 ABT1Q9ULW3 272 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 MAP4K5Q9Y4K4 846 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 PCDHB7Q9Y5E2 793 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 A0A0B4J293 547 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 TMEM202A6NGA9 273 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 NOTOA8MTQ0 251 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 FFAR1O14842 300 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 RPS5P46782 204 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 PCBP3P57721 371 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 RPS13P62277 151 aaKnown RBP12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 GALK2Q01415 458 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 GLYR1Q49A26 553 aaPredicted RBP12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 ZNF438Q7Z4V0 828 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 SLC34A3Q8N130 599 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 FAM181AQ8N9Y4 354 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 GALNT6Q8NCL4 622 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 OR7G1Q8NGA0 311 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 OR2AP1Q8NGE2 309 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 RNF31Q96EP0 1072 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 SLC6A18Q96N87 628 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 BHLHE41Q9C0J9 482 aaPredicted RBP12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 BRD9Q9H8M2 597 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 REV1Q9UBZ9 1251 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 SEC14L4Q9UDX3 406 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 KLHL20Q9Y2M5 609 aa12.42□□□□□ -0.42
PDZRN3-205ENST00000466780 TRBC2A0A5B9 178 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 TNFRSF10AO00220 468 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 BNIP3LO60238 219 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 ALX3O95076 343 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 CHRNEQ04844 493 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 ELAVL2Q12926 359 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 LARS2Q15031 903 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 SLC5A12Q1EHB4 618 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 PRSS53Q2L4Q9 553 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 TRIM60Q495X7 471 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 AGTRAPQ6RW13 159 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 PAQR6Q6TCH4 344 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 CLP1Q92989 425 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 MIXL1Q9H2W2 232 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 REEP4Q9H6H4 257 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 STOX2Q9P2F5 926 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 RAB23Q9ULC3 237 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 STUB1Q9UNE7 303 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 CMAHPQ9Y471 501 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 CCDC88CQ9P219 2028 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 TRBV4-1A0A0J9YWV2 114 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 IQCMA0A1B0GVH7 501 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 HYKKA2RU49 373 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 TLR4O00206 839 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 TPST2O60704 377 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 RHCEP18577 417 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 ITGB7P26010 798 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 CTSOP43234 321 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 STK19P49842 368 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 LIM2P55344 173 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 MXD1Q05195 221 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 LMAN2Q12907 356 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 ASAH1Q13510 395 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 KCNC3Q14003 757 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 PUM1Q14671 1186 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 PCM1Q15154 2024 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 DUSP7Q16829 419 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 SPIN4Q56A73 249 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 YIF1BQ5BJH7 314 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 GDPGP1Q6ZNW5 385 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 BCDIN3DQ7Z5W3 292 aaKnown RBP12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 TMEM150AQ86TG1 271 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 NOXA1Q86UR1 476 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 NINQ8N4C6 2090 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 DBF4BQ8NFT6 615 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 ECHDC3Q96DC8 303 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 BEX2Q9BXY8 128 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 C11orf54Q9H0W9 315 aaPredicted RBP12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 ABCB9Q9NP78 766 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 NDUFB11Q9NX14 153 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 ENOPH1Q9UHY7 261 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 LRFN2Q9ULH4 789 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 SNX11Q9Y5W9 270 aa12.41□□□□□ -0.42
PDZRN3-205ENST00000466780 ARRDC5A6NEK1 342 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 FADS2P1A8MWK0 482 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 SOX14O95416 240 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 FHP07954 510 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 GSTM1P09488 218 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 CSF3P09919 207 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 POLR2EP19388 210 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 PSMA1P25786 263 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 CD70P32970 193 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 OPRD1P41143 372 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 SPINT3P49223 89 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 SNRPGP62308 76 aaKnown RBP12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 GPAT3Q53EU6 434 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 Q6ZNB5 142 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 CCDC149Q6ZUS6 474 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 USP45Q70EL2 814 aa12.4□□□□□ -0.42
PDZRN3-205ENST00000466780 OXR1Q8N573 874 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms