RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, human

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT3A-208	ENST00000466601	CHTF18	Q8WVB6	975 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	THAP4	Q8WY91	577 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	NACC2	Q96BF6	587 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	MAPKAP1	Q9BPZ7	522 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	C20orf27	Q9GZN8	174 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	VN1R1	Q9GZP7	353 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	PRORY	Q9H606	182 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	LANCL2	Q9NS86	450 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	KCMF1	Q9P0J7	381 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ADAM29	Q9UKF5	820 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	DNAJC15	Q9Y5T4	150 aa		13.63	□□□□□ -0.23
DNMT3A-208	ENST00000466601	EPG5	Q9HCE0	2579 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601		A0A0A6YYD5	115 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	OR2W5	A6NFC9	320 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	SLC28A1	O00337	649 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	TMPRSS11D	O60235	418 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	B4GALT2	O60909	372 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	GBA	P04062	536 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	KLK1	P06870	262 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	CYC1	P08574	325 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	EFNA3	P52797	238 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	BTK	Q06187	659 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	HSP90B2P	Q58FF3	399 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ATG16L1	Q676U5	607 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	FAAH2	Q6GMR7	532 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	MRM1	Q6IN84	353 aa	Known RBP	13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	CYP20A1	Q6UW02	462 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	RNF165	Q6ZSG1	346 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	GPR155	Q7Z3F1	870 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	COMMD6	Q7Z4G1	85 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	PPP1R32	Q7Z5V6	425 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	C1orf52	Q8N6N3	182 aa	Known RBP	13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	FAM47B	Q8NA70	645 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	PLPP5	Q8NEB5	264 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	TWIST2	Q8WVJ9	160 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	APIP	Q96GX9	242 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	CATSPER2	Q96P56	530 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	IP6K3	Q96PC2	410 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	SORT1	Q99523	831 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	TUBB1	Q9H4B7	451 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	MANSC1	Q9H8J5	431 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	LYAR	Q9NX58	379 aa	Known RBP	13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	FBXW2	Q9UKT8	454 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	POLH	Q9Y253	713 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	RAP2C	Q9Y3L5	183 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	HS3ST3B1	Q9Y662	390 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	SPACA6	W5XKT8	324 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	CELSR3	Q9NYQ7	3312 aa		13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	MAP1B	P46821	2468 aa	Known RBP	13.62	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ARHGAP10	A1A4S6	786 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	CYR61	O00622	381 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	PEX12	O00623	359 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	DYNC1I1	O14576	645 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	RGS14	O43566	566 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ALOX12B	O75342	701 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	FAM58BP	P0C7Q3	252 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	LINC00032	P0C843	101 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	NR1D1	P20393	614 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	CPN2	P22792	545 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	TPP2	P29144	1249 aa	Predicted RBP	13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	HNRNPH2	P55795	449 aa	Known RBP	13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	RHAG	Q02094	409 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ACSM2A	Q08AH3	577 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	DEFB109B	Q30KR1	87 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	SPIN4	Q56A73	249 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	SPDYA	Q5MJ70	313 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	CCNYL2	Q5T2Q4	361 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ACSM2B	Q68CK6	577 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	MRGPRE	Q86SM8	312 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	GPR180	Q86V85	440 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	DDIAS	Q8IXT1	998 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	EFCAB3	Q8N7B9	438 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ZNF781	Q8N8C0	355 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	METTL21A	Q8WXB1	218 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ZNF75CP	Q92670	426 aa	Predicted RBP	13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	CSF3R	Q99062	836 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	INTS9	Q9NV88	658 aa	Known RBP	13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	THAP1	Q9NVV9	213 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	MS4A12	Q9NXJ0	267 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	PHF11	Q9UIL8	331 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	MRPS33	Q9Y291	106 aa	Known RBP	13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	CCL27	Q9Y4X3	112 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ASB4	Q9Y574	426 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	PTGDR2	Q9Y5Y4	395 aa		13.61	□□□□□ -0.23
DNMT3A-208	ENST00000466601	CLDN4	O14493	209 aa		13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	SOCS6	O14544	535 aa		13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	KLF11	O14901	512 aa		13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	PCDH17	O14917	1159 aa		13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	PIP5K1B	O14986	540 aa		13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	PRMT3	O60678	531 aa		13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	SNN	O75324	88 aa	Predicted RBP	13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	RSL1D1	O76021	490 aa	Known RBP	13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	C8orf89	P0DMQ9	161 aa		13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	RPL14	P50914	215 aa	Known RBP	13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	HNRNPF	P52597	415 aa	Known RBP	13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	BTG2	P78543	158 aa		13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	ATP1A4	Q13733	1029 aa		13.6	□□□□□ -0.23
DNMT3A-208	ENST00000466601	TMEM205	Q6UW68	189 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms