RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 FOLR1P15328 257 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 DDX5P17844 614 aaKnown RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 TSPAN8P19075 237 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 ITGAXP20702 1163 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 MDH1P40925 334 aaKnown RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 TSFMP43897 325 aaKnown RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 ERVPABLB-1P60509 514 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 ARF3P61204 181 aaPredicted RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 PPP1CAP62136 330 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 GABREP78334 506 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 SRSF3P84103 164 aaKnown RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 MEF2AQ02078 507 aaPredicted RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 CYP4F3Q08477 520 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 BST1Q10588 318 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 CSTF3Q12996 717 aaKnown RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 TRAF3Q13114 568 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 MAD2L1Q13257 205 aaPredicted RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 CUL3Q13618 768 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 DDX39BQ13838 428 aaKnown RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 FAM53BQ14153 422 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 C16orf72Q14CZ0 275 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 GPR19Q15760 415 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 ZXDCQ2QGD7 858 aaPredicted RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 ZNF385BQ569K4 471 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 SGO1Q5FBB7 561 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 C3orf38Q5JPI3 329 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 SPDYAQ5MJ70 313 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 SH2D4BQ5SQS7 431 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 FCRL6Q6DN72 434 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 PRMT9Q6P2P2 845 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 ZCCHC23Q6ZST2 131 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 B3GNT8Q7Z7M8 397 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 CUZD1Q86UP6 607 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 DDIASQ8IXT1 998 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 FAM9CQ8IZT9 166 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 OR52B6Q8NGF0 335 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 NT5CQ8TCD5 201 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 AGAP11Q8TF27 550 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 CKAP2Q8WWK9 683 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 RGMAQ96B86 450 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 MTFMTQ96DP5 389 aaKnown RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 MVB12AQ96EY5 273 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 METTL2AQ96IZ6 378 aaKnown RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 EAF1Q96JC9 268 aaPredicted RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 VPS50Q96JG6 964 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 KCNC2Q96PR1 638 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 OR2A5Q96R48 311 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 SIKE1Q9BRV8 207 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 TBCDQ9BTW9 1192 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 NSRP1Q9H0G5 558 aaKnown RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 GSTO2Q9H4Y5 243 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 ACTR5Q9H9F9 607 aaPredicted RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 FAM60AQ9NP50 221 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 NDOR1Q9UHB4 597 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 PILRAQ9UKJ1 303 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 ZNF490Q9ULM2 529 aaPredicted RBP5.65□□□□□ -1.5
NUP98-208ENST00000461047 PPT2Q9UMR5 302 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 KLHL20Q9Y2M5 609 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 NEUROG3Q9Y4Z2 214 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 PCDHGA3Q9Y5H0 932 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 SLC22A7Q9Y694 548 aa5.65□□□□□ -1.5
NUP98-208ENST00000461047 ZFHX2Q9C0A1 2572 aaPredicted RBP5.65□□□□□ -1.51
NUP98-208ENST00000461047 LRP4O75096 1905 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 OTOGLQ3ZCN5 2332 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 LOC105369274A0A096LPK9 316 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 IGKV1-8A0A0C4DH67 115 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 LOC102723532A0A0G2JNH3 316 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 A0A1B0GX78 115 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 BLACEA4D250 179 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 SYNDIG1LA6NDD5 238 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 C9J4A7 227 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 H0YIG0 161 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 PSMD12O00232 456 aaPredicted RBP5.64□□□□□ -1.51
NUP98-208ENST00000461047 AGRPO00253 132 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 ZNF749O43361 778 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 B3GALT2O43825 422 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 LCMT2O60294 686 aaKnown RBP5.64□□□□□ -1.51
NUP98-208ENST00000461047 CTSVO60911 334 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 SEC22BO75396 215 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 SEMA3DO95025 777 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 TGDSO95455 350 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 VIMP08670 466 aaKnown RBP5.64□□□□□ -1.51
NUP98-208ENST00000461047 ALOX12P18054 663 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 EPORP19235 508 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 IL10P22301 178 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 TLX1P31314 330 aaPredicted RBP5.64□□□□□ -1.51
NUP98-208ENST00000461047 BCL6P41182 706 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 GSTM5P46439 218 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 MTTPP55157 894 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 DCDP81605 110 aaKnown RBP5.64□□□□□ -1.51
NUP98-208ENST00000461047 OCA2Q04671 838 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 ABHD18Q0P651 414 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 E2F2Q14209 437 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 KCNAB1Q14722 419 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 RTP5Q14D33 572 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 ZIC1Q15915 447 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 SPIN4Q56A73 249 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 TOR1AIP1Q5JTV8 583 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 DEPDC1Q5TB30 811 aa5.64□□□□□ -1.51
NUP98-208ENST00000461047 KHDRBS2Q5VWX1 349 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms