RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ZNF547Q8IVP9 402 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 MMP21Q8N119 569 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 C1orf52Q8N6N3 182 aaKnown RBP11.88□□□□□ -0.51
LINC00959-201ENST00000456581 PKP4Q99569 1192 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 SDHCQ99643 169 aaPredicted RBP11.88□□□□□ -0.51
LINC00959-201ENST00000456581 SLC29A3Q9BZD2 475 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 GPATCH2Q9NW75 528 aa11.88□□□□□ -0.51
LINC00959-201ENST00000456581 STOX2Q9P2F5 926 aaPredicted RBP11.88□□□□□ -0.51
LINC00959-201ENST00000456581 SLC5A10A0PJK1 596 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 AGAP5A6NIR3 686 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 H3BM21 787 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 NPC1O15118 1278 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 ATG13O75143 517 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 C9P02748 559 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 IGFBP1P08833 259 aaPredicted RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 GPX2P18283 190 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 GJA4P35212 333 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 FEN1P39748 380 aaKnown RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 GPR1P46091 355 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PRLHRP49683 370 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 ITGA1P56199 1179 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 CNTN1Q12860 1018 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 CCDC92Q53HC0 331 aaPredicted RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 ZNF385BQ569K4 471 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 AGTRAPQ6RW13 159 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 EIF3MQ7L2H7 374 aaKnown RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 LRRC70Q7Z2Q7 622 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 THOC6Q86W42 341 aaKnown RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 CYP4Z2PQ8N1L4 340 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 WFIKKN2Q8TEU8 576 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 OR8D1Q8WZ84 308 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 CIDECQ96AQ7 238 aaPredicted RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 CCM2Q9BSQ5 444 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 TMEM245Q9H330 911 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PLSCR3Q9NRY6 295 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 ZNF226Q9NYT6 803 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 NDUFAF4Q9P032 175 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 LYVE1Q9Y5Y7 322 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 ADORA3P0DMS8 318 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PRPS2P11908 318 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 ITGB7P26010 798 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 IMPA1P29218 277 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 CTSKP43235 329 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 MEF2AQ02078 507 aaPredicted RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 KCNC3Q14003 757 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 DOC2AQ14183 400 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 NFE2L1Q14494 772 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 ELAVL3Q14576 367 aaKnown RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 EXOC3L2Q2M3D2 409 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 BCDIN3DQ7Z5W3 292 aaKnown RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 UBE2J2Q8N2K1 259 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 TCAIMQ8N3R3 496 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 SVOPQ8N4V2 548 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 ZNF675Q8TD23 568 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 KLK6Q92876 244 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 NUS1Q96E22 293 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 CTRCQ99895 268 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 TM7SF3Q9NS93 570 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 FBXL12Q9NXK8 326 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 SERGEFQ9UGK8 458 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PSORS1C1Q9UIG5 152 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PCDHGA3Q9Y5H0 932 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 CFAP20Q9Y6A4 193 aaKnown RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 DNMT3AQ9Y6K1 912 aaPredicted RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 LAMA1P25391 3075 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PRR23AA6NEV1 266 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 TNFRSF11BO00300 401 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 WWP2O00308 870 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PCDH17O14917 1159 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 KPNA5O15131 536 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 KMOO15229 486 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 SUV39H1O43463 412 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PSIP1O75475 530 aaKnown RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 GSTM1P09488 218 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 AZGP1P25311 298 aaKnown RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 POU1F1P28069 291 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 P2RY2P41231 377 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PCYT1AP49585 367 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 HNMTP50135 292 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 RAE1P78406 368 aaKnown RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 SPIBQ01892 262 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 ST3GAL4Q11206 333 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 LEXMQ3ZCV2 418 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 NANOGNBQ7Z5D8 188 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 SYNPOQ8N3V7 929 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 DNAJC22Q8N4W6 341 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 VANGL1Q8TAA9 524 aaPredicted RBP11.87□□□□□ -0.51
LINC00959-201ENST00000456581 FGF14Q92915 247 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 LRIG1Q96JA1 1093 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 HRASLS5Q96KN8 279 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 NECTIN4Q96NY8 510 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 DUSP26Q9BV47 211 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 LGR4Q9BXB1 951 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 BEX2Q9BXY8 128 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 RERGLQ9H628 205 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 SFXN1Q9H9B4 322 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PRSS16Q9NQE7 514 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 MS4A12Q9NXJ0 267 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 RPS6KA6Q9UK32 745 aa11.87□□□□□ -0.51
LINC00959-201ENST00000456581 PLAGL1Q9UM63 463 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms