RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	LRRC26	Q2I0M4	334 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	ATAD3C	Q5T2N8	411 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	CST9	Q5W186	159 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	TYW3	Q6IPR3	259 aa	Known RBP	12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	PLEKHM3	Q6ZWE6	761 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	TSPYL5	Q86VY4	417 aa	Predicted RBP	12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	CALHM3	Q86XJ0	350 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	AADAT	Q8N5Z0	425 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	GLB1L3	Q8NCI6	653 aa	Predicted RBP	12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	SLC22A8	Q8TCC7	542 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	GTF3C2	Q8WUA4	911 aa	Predicted RBP	12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	SLC35A5	Q9BS91	424 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	TMEM39A	Q9NV64	488 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	TVP23B	Q9NYZ1	205 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	CFAP97	Q9P2B7	532 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	B4GALT6	Q9UBX8	382 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	PCDHB1	Q9Y5F3	818 aa		12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	TDRD15	B5MCY1	1934 aa	Known RBP	12.02	□□□□□ -0.49
DDR1-238	ENST00000446312	GLOD5	A6NK44	160 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	ERVH48-1	M5A8F1	160 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	PQBP1	O60828	265 aa	Known RBP	12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	ENTPD6	O75354	484 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	NCR1	O76036	304 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	IGLV3-27	P01718	113 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	KLK1	P06870	262 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	PEPD	P12955	493 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	RPS19	P39019	145 aa	Known RBP	12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	CBX5	P45973	191 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	CTSC	P53634	463 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	KCNJ10	P78508	379 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	DSC1	Q08554	894 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	C2orf80	Q0P641	193 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	DUSP7	Q16829	419 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	TCTN1	Q2MV58	587 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	C6orf132	Q5T0Z8	1188 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	FAM131A	Q6UXB0	335 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	DPY19L3	Q6ZPD9	716 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	DNAJC22	Q8N4W6	341 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	COQ8B	Q96D53	544 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	TXNDC15	Q96J42	360 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	ASPN	Q9BXN1	380 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	BRD7	Q9NPI1	651 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	COMMD3	Q9UBI1	195 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	WBP11	Q9Y2W2	641 aa	Known RBP	12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	LYVE1	Q9Y5Y7	322 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	RALGAPA2	Q2PPJ7	1873 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	PRR23A	A6NEV1	266 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	NOS1AP	O75052	506 aa	Predicted RBP	12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	GAST	P01350	101 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	PKLR	P30613	574 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	LMAN2	Q12907	356 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	HSPB3	Q12988	150 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	PTGES3	Q15185	160 aa	Known RBP	12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	CLEC12A	Q5QGZ9	265 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	TRIM46	Q7Z4K8	759 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	TSEN54	Q7Z6J9	526 aa	Known RBP	12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	LILRB2	Q8N423	598 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	TCEANC	Q8N8B7	351 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	HJURP	Q8NCD3	748 aa	Predicted RBP	12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	UCN3	Q969E3	161 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	FBXL12	Q9NXK8	326 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	CLCA1	A8K7I4	914 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	PLD2	O14939	933 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	FRS3	O43559	492 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	TSPAN6	O43657	245 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	CDRT1	O95170	752 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	ITGAM	P11215	1152 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	MAP4K2	Q12851	820 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	CDK10	Q15131	360 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	RGN	Q15493	299 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	PROX2	Q3B8N5	592 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	OR2G6	Q5TZ20	316 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	C22orf42	Q6IC83	251 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	THOC6	Q86W42	341 aa	Known RBP	12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	SLAIN1	Q8ND83	568 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	HUS1B	Q8NHY5	278 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	USP7	Q93009	1102 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	GIMAP5	Q96F15	307 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	ANKRA2	Q9H9E1	313 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	FBXO8	Q9NRD0	319 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	PSORS1C1	Q9UIG5	152 aa		12.01	□□□□□ -0.49
DDR1-238	ENST00000446312	PATJ	Q8NI35	1801 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	ADAMDEC1	O15204	470 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	GALT	P07902	379 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	SRC	P12931	536 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	CENPA	P49450	140 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	BLVRA	P53004	296 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	TAS2R50	P59544	299 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	RAB8A	P61006	207 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	METTL2B	Q6P1Q9	378 aa	Known RBP	12	□□□□□ -0.49
DDR1-238	ENST00000446312	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	12	□□□□□ -0.49
DDR1-238	ENST00000446312	CNDP2	Q96KP4	475 aa	Known RBP	12	□□□□□ -0.49
DDR1-238	ENST00000446312	RDH12	Q96NR8	316 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	KCTD5	Q9NXV2	234 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	TRBV4-1	A0A0J9YWV2	114 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312		A0A1W2PQ09	198 aa		12	□□□□□ -0.49
DDR1-238	ENST00000446312	FADS2P1	A8MWK0	482 aa		12	□□□□□ -0.49

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