RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 PSME2Q9UL46 239 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 CHTOPQ9Y3Y2 248 aaKnown RBP4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 ETV7Q9Y603 341 aa4.78□□□□□ -1.64
TM9SF3-202ENST00000443638 UMODL1Q5DID0 1318 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 KIF16BQ96L93 1317 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 TRBV5-5A0A0J9YX44 114 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 GSAPA4D1B5 854 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 MTMR11A4FU01 709 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 ZNF264O43296 627 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 AKAP8O43823 692 aaKnown RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 EXTL3O43909 919 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 KIF5CO60282 957 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 SERPINA3P01011 423 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 PRKCGP05129 697 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 HIST1H2AGP0C0S8 130 aaPredicted RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 CA4P22748 312 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 CERS1P27544 350 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 PRMT2P55345 433 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 SH3BGRP55822 239 aaPredicted RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 PLP2Q04941 152 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 SLC20A2Q08357 652 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 PLD1Q13393 1074 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 GTF2H2Q13888 395 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 TMEM132DQ14C87 1099 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 PPP1R7Q15435 360 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 CCDC57Q2TAC2 916 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 DCAF4L1Q3SXM0 396 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 LRIT3Q3SXY7 679 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 HSP90AB3PQ58FF7 597 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 XKR3Q5GH77 459 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 ZNF311Q5JNZ3 666 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 C1orf185Q5T7R7 199 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 TTC23Q5W5X9 447 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 SEL1L3Q68CR1 1132 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 SNRNP48Q6IEG0 339 aaKnown RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 PYHIN1Q6K0P9 492 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 CAPN13Q6MZZ7 669 aaPredicted RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 GTF2H2CQ6P1K8 395 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 ANGPTL8Q6UXH0 198 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 PIWIL4Q7Z3Z4 852 aaKnown RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 DCLK2Q8N568 766 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 MAPKAPK5-AS1Q8N8E1 139 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 CCDC148Q8NFR7 591 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 HSD17B8Q92506 261 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 HIST1H2ACQ93077 130 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 SENP5Q96HI0 755 aaPredicted RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 AGPAT1Q99943 283 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 RTP3Q9BQQ7 232 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 CCM2Q9BSQ5 444 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 NDUFAF3Q9BU61 184 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 TRAF4Q9BUZ4 470 aaPredicted RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 FUNDC2Q9BWH2 189 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 LRRCC1Q9C099 1032 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 LAT2Q9GZY6 243 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 NACA2Q9H009 215 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 MAGT1Q9H0U3 335 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 APMAPQ9HDC9 416 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 SDR39U1Q9NRG7 319 aaPredicted RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 TUBA8Q9NY65 449 aaPredicted RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 TECRQ9NZ01 308 aaKnown RBP4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 ZNF224Q9NZL3 707 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 EPHA6Q9UF33 1036 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 BCAP29Q9UHQ4 241 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 SLC12A6Q9UHW9 1150 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 SIX4Q9UIU6 781 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 AP4B1Q9Y6B7 739 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 PTPRUQ92729 1446 aa4.77□□□□□ -1.65
TM9SF3-202ENST00000443638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.77□□□□□ -1.652e-6■□□□□ 10.3
TM9SF3-202ENST00000443638 A0A1B0GVT2 93 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 A0A1W2PN81 502 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 ERICH4A6NGS2 130 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 MANSC4A6NHS7 340 aaPredicted RBP4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 OR52A4PA6NMU1 304 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 C4orf47A7E2U8 309 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 WASH3PC4AMC7 463 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 INAFM1C9JVW0 142 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 ZNF587BE7ETH6 402 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 PPIAL4DF5H284 164 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 KLF11O14901 512 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 MLNRO43193 412 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 CIB2O75838 187 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 EML2O95834 649 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 IGHV4-31P0DP07 118 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 HLA-DOBP13765 273 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 CYP11B1P15538 503 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 HNF1AP20823 631 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 CDH3P22223 829 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 ALDH4A1P30038 563 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 CHRNA7P36544 502 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 USP8P40818 1118 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 CETN2P41208 172 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 RFX2P48378 723 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 LIMK2P53671 638 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 HSPA14Q0VDF9 509 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 NME3Q13232 169 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 CEACAM7Q14002 265 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 OR1C1Q15619 314 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 MPPE1Q53F39 396 aa4.76□□□□□ -1.65
TM9SF3-202ENST00000443638 EFHC1Q5JVL4 640 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms