RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 CYC1P08574 325 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 COX6A1P12074 109 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 BSGP35613 385 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 HNRNPFP52597 415 aaKnown RBP18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 SLAMF1Q13291 335 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 MPP2Q14168 576 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 SOWAHCQ53LP3 525 aaPredicted RBP18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 ZCCHC23Q6ZST2 131 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 ANKRD37Q7Z713 158 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 TMEM52Q8NDY8 209 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 SLC39A7Q92504 469 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 ABHD17AQ96GS6 310 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 CNDP1Q96KN2 507 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 PTCHD1Q96NR3 888 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 CSF3RQ99062 836 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 SEMA4CQ9C0C4 833 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 STMN4Q9H169 189 aaPredicted RBP18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 ADNPQ9H2P0 1102 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 ZNF160Q9HCG1 818 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 LYRM4Q9HD34 91 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 TNFRSF12AQ9NP84 129 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 ATP13A2Q9NQ11 1180 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 FBXW2Q9UKT8 454 aa18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 GCN1Q92616 2671 aaKnown RBP18.32■□□□□ 0.52
SEMA3B-206ENST00000439487 IGHV1-45A0A0A0MS14 117 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 CYR61O00622 381 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 PRMT3O60678 531 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 ULK1O75385 1050 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 HPP00738 406 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 CHN1P15882 459 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 MAOAP21397 527 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 SERPINB3P29508 390 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 TSFMP43897 325 aaKnown RBP18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 ARFIP1P53367 373 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 ABRAXAS2Q15018 415 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 PCOLCEQ15113 449 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 NSDHLQ15738 373 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 SCIMPQ6UWF3 145 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 QSOX2Q6ZRP7 698 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 NDUFAF7Q7L592 441 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 CPEB2Q7Z5Q1 589 aaKnown RBP18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 PARP9Q8IXQ6 854 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 AMER2Q8N7J2 671 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 CLEC1AQ8NC01 280 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 LSM14AQ8ND56 463 aaKnown RBP18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 PKNOX2Q96KN3 472 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 MRPL1Q9BYD6 325 aaKnown RBP18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 BRF2Q9HAW0 419 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 NECTIN3Q9NQS3 549 aa18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 C19orf25Q9UFG5 118 aaPredicted RBP18.31■□□□□ 0.52
SEMA3B-206ENST00000439487 NSG1A0A0A6YYJ2 146 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 WDR91A4D1P6 747 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 MKRN2OSH3BPM6 223 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 PCDH17O14917 1159 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 TM9SF1O15321 606 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 NPHS1O60500 1241 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 CRCPO75575 148 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 SEMA3DO95025 777 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 GBAP04062 536 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 CPN2P22792 545 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 SERPINB4P48594 390 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 MAGOHP61326 146 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 Q0VFX4 171 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 AIMP2Q13155 320 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 RAPSNQ13702 412 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 HDXQ7Z353 690 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 CUZD1Q86UP6 607 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 NUDCD3Q8IVD9 361 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 METTL4Q8N3J2 472 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 ZCCHC7Q8N3Z6 543 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 GALNT16Q8N428 558 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 FDCSPQ8NFU4 85 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 ADAMTS18Q8TE60 1221 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 TLCD1Q96CP7 247 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 ZNF700Q9H0M5 742 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 DDX31Q9H8H2 851 aaKnown RBP18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 PRDM9Q9NQV7 894 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 PRTFDC1Q9NRG1 225 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 AHSPQ9NZD4 102 aa18.3■□□□□ 0.52
SEMA3B-206ENST00000439487 BSNQ9UPA5 3926 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 A0A0A6YYD5 115 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 A0A1W2PQ72 361 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 H3BQF6 201 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 K7EM74 188 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 TMPRSS11DO60235 418 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 CEACAM4O75871 244 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 SEC24DO94855 1032 aaPredicted RBP18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 ZWINTO95229 277 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 CHRNGP07510 517 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 NR1D1P20393 614 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 ITGA3P26006 1051 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 HNRNPH2P55795 449 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 CSTF3Q12996 717 aaKnown RBP18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 RCN2Q14257 317 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 SFT2D3Q587I9 215 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 CYP20A1Q6UW02 462 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 NUDT13Q86X67 352 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 EFCAB3Q8N7B9 438 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 ANKRD42Q8N9B4 389 aa18.29■□□□□ 0.52
SEMA3B-206ENST00000439487 SREK1Q8WXA9 508 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms