RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 GNAZP19086 355 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 GSTM2P28161 218 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 GABRB3P28472 473 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 TRHRP34981 398 aaPredicted RBP7.25□□□□□ -1.25
VPS50-204ENST00000438395 PTGS2P35354 604 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 ELK3P41970 407 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 MEOX1P50221 254 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 SSR4P51571 173 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 CLCN2P51788 898 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 BTN3A2P78410 334 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 BTG2P78543 158 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 HSF1Q00613 529 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 PLGLB1Q02325 96 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 MGAT5Q09328 741 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 HYAL2Q12891 473 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 SLBPQ14493 270 aaKnown RBP eCLIP7.25□□□□□ -1.25
VPS50-204ENST00000438395 HP1BP3Q5SSJ5 553 aaPredicted RBP7.25□□□□□ -1.25
VPS50-204ENST00000438395 TEDDM1Q5T9Z0 273 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 TRIM40Q6P9F5 258 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 PAOXQ6QHF9 649 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 SHISA2Q6UWI4 295 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 TMIGD1Q6UXZ0 262 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 MEX3BQ6ZN04 569 aaKnown RBP7.25□□□□□ -1.25
VPS50-204ENST00000438395 TREML1Q86YW5 311 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 SIAH3Q8IW03 269 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 SLC35F6Q8N357 371 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 CPSF7Q8N684 471 aaKnown RBP7.25□□□□□ -1.25
VPS50-204ENST00000438395 AMER2Q8N7J2 671 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 B3GNT7Q8NFL0 401 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 ELP5Q8TE02 316 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 UTP15Q8TED0 518 aaKnown RBP7.25□□□□□ -1.25
VPS50-204ENST00000438395 PHF10Q8WUB8 498 aaKnown RBP7.25□□□□□ -1.25
VPS50-204ENST00000438395 ASB5Q8WWX0 329 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 GAL3ST3Q96A11 431 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 VMP1Q96GC9 406 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 PDLIM2Q96JY6 352 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 OR4K3Q96R72 315 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 NPAS2Q99743 824 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 TRIM8Q9BZR9 551 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 CNOT10Q9H9A5 744 aaKnown RBP7.25□□□□□ -1.25
VPS50-204ENST00000438395 PRTFDC1Q9NRG1 225 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 NSMCE4AQ9NXX6 385 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 WWOXQ9NZC7 414 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 SNX12Q9UMY4 172 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 ZNF835Q9Y2P0 537 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 NEU2Q9Y3R4 380 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 CLCA3PQ9Y6N3 262 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 SPACA6W5XKT8 324 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 SPG11Q96JI7 2443 aa7.25□□□□□ -1.25
VPS50-204ENST00000438395 IGKV3D-11A0A0A0MRZ8 115 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 FAM95CA0A1B0GW59 222 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 ANKDD1BA6NHY2 528 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 A8MVJ9 347 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 CES2O00748 559 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 CLGNO14967 610 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 PEX1O43933 1283 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 ITGA10O75578 1167 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 ZFAND5O76080 213 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 CAPN3P20807 821 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 PTGER1P34995 402 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 RFC3P40938 356 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 PLA2G16P53816 162 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 HSD17B7P56937 341 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 RIPPLY3P57055 190 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 TIAL1Q01085 375 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS50-204ENST00000438395 DR1Q01658 176 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 BMPR2Q13873 1038 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 EFTUD2Q15029 972 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS50-204ENST00000438395 OCLNQ16625 522 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 PAGE2BQ5JRK9 111 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 TMEM211Q6ICI0 200 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 ARHGAP11AQ6P4F7 1023 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 TRMT10BQ6PF06 316 aaKnown RBP7.24□□□□□ -1.25
VPS50-204ENST00000438395 SBSNQ6UWP8 590 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 GK5Q6ZS86 529 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 CDH24Q86UP0 819 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 DOLPP1Q86YN1 238 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 GPALPP1Q8IXQ4 340 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 KLHL7Q8IXQ5 586 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 DMRTC2Q8IXT2 367 aaPredicted RBP7.24□□□□□ -1.25
VPS50-204ENST00000438395 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.24□□□□□ -1.25
VPS50-204ENST00000438395 ZNF595Q8IYB9 648 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 SHISA5Q8N114 240 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 TCAIMQ8N3R3 496 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 TMEM132CQ8N3T6 1108 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 SNX31Q8N9S9 440 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 ANKRD53Q8N9V6 530 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 FAM47BQ8NA70 645 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 ASB15Q8WXK1 588 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 ANKRD7Q92527 254 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 DAZLQ92904 295 aaKnown RBP7.24□□□□□ -1.25
VPS50-204ENST00000438395 TSPAN17Q96FV3 270 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 PDLIM5Q96HC4 596 aaKnown RBP7.24□□□□□ -1.25
VPS50-204ENST00000438395 SEC16BQ96JE7 1060 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 CAPS2Q9BXY5 557 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 ROGDIQ9GZN7 287 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 PITHD1Q9GZP4 211 aaPredicted RBP7.24□□□□□ -1.25
VPS50-204ENST00000438395 SPNS1Q9H2V7 528 aa7.24□□□□□ -1.25
VPS50-204ENST00000438395 TP63Q9H3D4 680 aaPredicted RBP7.24□□□□□ -1.25
VPS50-204ENST00000438395 ADAP2Q9NPF8 381 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms