RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 UBFD1O14562 309 aaKnown RBP14.62□□□□□ -0.07
TREX1-201ENST00000433541 PCDH17O14917 1159 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 NPHS1O60500 1241 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 ETHE1O95571 254 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 GBAP04062 536 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 MAOAP21397 527 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 ITGA3P26006 1051 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 TLX1P31314 330 aaPredicted RBP14.62□□□□□ -0.07
TREX1-201ENST00000433541 TSFMP43897 325 aaKnown RBP14.62□□□□□ -0.07
TREX1-201ENST00000433541 HTR6P50406 440 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 LIM2P55344 173 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 BTKQ06187 659 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 CSTF3Q12996 717 aaKnown RBP14.62□□□□□ -0.07
TREX1-201ENST00000433541 RAPSNQ13702 412 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 LY6DQ14210 128 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 CHI3L2Q15782 390 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 TNFAIP8L3Q5GJ75 292 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 DCAF10Q5QP82 559 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 CROCCQ5TZA2 2017 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 CLEC6AQ6EIG7 209 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 KIRREL2Q6UWL6 708 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 ZNF793Q6ZN11 406 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 LANCL3Q6ZV70 420 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 UBE3DQ7Z6J8 389 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 CUZD1Q86UP6 607 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 SHISA5Q8N114 240 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 OR11G2Q8NGC1 345 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 TTC9Q92623 222 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 MAPKAP1Q9BPZ7 522 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 WDR41Q9HAD4 459 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 ZNF160Q9HCG1 818 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 LYRM4Q9HD34 91 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 ATP13A2Q9NQ11 1180 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 PRTFDC1Q9NRG1 225 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 PHF11Q9UIL8 331 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 DAPP1Q9UN19 280 aa14.62□□□□□ -0.07
TREX1-201ENST00000433541 TNRC6AQ8NDV7 1962 aaKnown RBP14.62□□□□□ -0.07
TREX1-201ENST00000433541 AZIN1O14977 448 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 SEMA3DO95025 777 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 HSPA4LO95757 839 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 KLK1P06870 262 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 UROSP10746 265 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 HSD3B1P14060 373 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 HSD3B2P26439 372 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 SERPINB3P29508 390 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 BUD31P41223 144 aaPredicted RBP14.61□□□□□ -0.07
TREX1-201ENST00000433541 ETV4P43268 484 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 FOXA1P55317 472 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 OR4D2P58180 307 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 BTG2P78543 158 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 KCNAB2Q13303 367 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 SH2D4BQ5SQS7 431 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 CCNYL2Q5T2Q4 361 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 AGBL2Q5U5Z8 902 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 CLNKQ7Z7G1 428 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 PARP9Q8IXQ6 854 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 GBP7Q8N8V2 638 aaPredicted RBP14.61□□□□□ -0.07
TREX1-201ENST00000433541 TSLPQ969D9 159 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 CSF3RQ99062 836 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 TRIM55Q9BYV6 548 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 PRDM9Q9NQV7 894 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 LANCL2Q9NS86 450 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 RIC8BQ9NVN3 520 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 LYARQ9NX58 379 aaKnown RBP14.61□□□□□ -0.07
TREX1-201ENST00000433541 MS4A12Q9NXJ0 267 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 PSD3Q9NYI0 1048 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 VPS29Q9UBQ0 182 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 PPT2Q9UMR5 302 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 DOCK10Q96BY6 2186 aa14.61□□□□□ -0.07
TREX1-201ENST00000433541 PIEZO2Q9H5I5 2752 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 IGHV3-20A0A0C4DH32 117 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 MASP2O00187 686 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 BIRC5O15392 142 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 EEDO75530 441 aaKnown RBP14.6□□□□□ -0.07
TREX1-201ENST00000433541 SEC24DO94855 1032 aaPredicted RBP14.6□□□□□ -0.07
TREX1-201ENST00000433541 HPP00738 406 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 CHRNGP07510 517 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 CYC1P08574 325 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 SERPINB5P36952 375 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 ARFIP1P53367 373 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 MAPK12P53778 367 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 HMGCS1Q01581 520 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 RHAGQ02094 409 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 ACSM2AQ08AH3 577 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 STX4Q12846 297 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 AIMP2Q13155 320 aaKnown RBP14.6□□□□□ -0.07
TREX1-201ENST00000433541 LINC00303Q3SY05 128 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 SFT2D3Q587I9 215 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 ARL13AQ5H913 290 aaPredicted RBP14.6□□□□□ -0.07
TREX1-201ENST00000433541 ACSM2BQ68CK6 577 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 QSOX2Q6ZRP7 698 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 NDUFAF7Q7L592 441 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 COMMD6Q7Z4G1 85 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 CPEB2Q7Z5Q1 589 aaKnown RBP14.6□□□□□ -0.07
TREX1-201ENST00000433541 ANKRD37Q7Z713 158 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 GPR180Q86V85 440 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 APLFQ8IW19 511 aaPredicted RBP14.6□□□□□ -0.07
TREX1-201ENST00000433541 DDIASQ8IXT1 998 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 ZNF595Q8IYB9 648 aa14.6□□□□□ -0.07
TREX1-201ENST00000433541 C1orf52Q8N6N3 182 aaKnown RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms