RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 SNRNP40Q96DI7 357 aaKnown RBP13.94□□□□□ -0.18
RTN4-210ENST00000427710 CMTM7Q96FZ5 175 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 KCNC2Q96PR1 638 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 NPAS2Q99743 824 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 CCDC77Q9BR77 488 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 CLK4Q9HAZ1 481 aaKnown RBP13.94□□□□□ -0.18
RTN4-210ENST00000427710 ASF1BQ9NVP2 202 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 KCMF1Q9P0J7 381 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 TMCO1Q9UM00 188 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 DAPP1Q9UN19 280 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 PCDHGA10Q9Y5H3 936 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 CLDN16Q9Y5I7 305 aa13.94□□□□□ -0.18
RTN4-210ENST00000427710 GTF3C1Q12789 2109 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 MYO7BQ6PIF6 2116 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 A0A088AWK7 358 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 TCRBV16S1A1N1A0A5B0 115 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 CYR61O00622 381 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 PLPP1O14494 284 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 ZNF500O60304 480 aaPredicted RBP13.93□□□□□ -0.18
RTN4-210ENST00000427710 DLX3O60479 287 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 PRKRAO75569 313 aaKnown RBP13.93□□□□□ -0.18
RTN4-210ENST00000427710 CLDN9O95484 217 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 ICAM2P13598 275 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 ZNF10P21506 573 aaPredicted RBP13.93□□□□□ -0.18
RTN4-210ENST00000427710 GNLYP22749 145 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 HSD17B3P37058 310 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 RAP1GDS1P52306 607 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 SRSF11Q05519 484 aaKnown RBP13.93□□□□□ -0.18
RTN4-210ENST00000427710 TRAF3Q13114 568 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 SLC13A2Q13183 592 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 ZNF169Q14929 603 aaPredicted RBP13.93□□□□□ -0.18
RTN4-210ENST00000427710 AP5B1Q2VPB7 878 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 UNC50Q53HI1 259 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 SGO1Q5FBB7 561 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 OR4C11Q6IEV9 310 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 CHSY3Q70JA7 882 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 CRLF3Q8IUI8 442 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 SCUBE1Q8IWY4 988 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 IQCKQ8N0W5 287 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 OR4F6Q8NGB9 312 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 OR1N1Q8NGS0 311 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 WDR20Q8TBZ3 569 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 M1APQ8TC57 530 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 TRPC4APQ8TEL6 797 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 ZNF483Q8TF39 744 aaPredicted RBP13.93□□□□□ -0.18
RTN4-210ENST00000427710 TBCDQ9BTW9 1192 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 C12orf65Q9H3J6 166 aaKnown RBP13.93□□□□□ -0.18
RTN4-210ENST00000427710 FETUBQ9UGM5 382 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 MMACHCQ9Y4U1 282 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 PCDHGA11Q9Y5H2 935 aa13.93□□□□□ -0.18
RTN4-210ENST00000427710 SAGE2PA6NJ88 616 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 H0YIV9 168 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 UGDHO60701 494 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 LDB3O75112 727 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 EEDO75530 441 aaKnown RBP13.92□□□□□ -0.18
RTN4-210ENST00000427710 MYO1DO94832 1006 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 SLU7O95391 586 aaKnown RBP13.92□□□□□ -0.18
RTN4-210ENST00000427710 HIST1H1TP22492 207 aaPredicted RBP13.92□□□□□ -0.18
RTN4-210ENST00000427710 HPDP32754 393 aaPredicted RBP13.92□□□□□ -0.18
RTN4-210ENST00000427710 PIK3CBP42338 1070 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 SLAMF1Q13291 335 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 MRPL49Q13405 166 aaKnown RBP13.92□□□□□ -0.18
RTN4-210ENST00000427710 EXT1Q16394 746 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 TMEM35AQ53FP2 167 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 ABHD17BQ5VST6 288 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 TTC19Q6DKK2 380 aaPredicted RBP13.92□□□□□ -0.18
RTN4-210ENST00000427710 LETMD1Q6P1Q0 360 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 MILR1Q7Z6M3 343 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 BEST3Q8N1M1 668 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 ARMC2Q8NEN0 867 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 RGMAQ96B86 450 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 TMEM237Q96Q45 408 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 NTMT1Q9BV86 223 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.92□□□□□ -0.185e-12■■□□□ 11.4
RTN4-210ENST00000427710 CDCP1Q9H5V8 836 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 MMP25Q9NPA2 562 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 FARSBQ9NSD9 589 aaKnown RBP13.92□□□□□ -0.18
RTN4-210ENST00000427710 ANKRD10Q9NXR5 420 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 STMN3Q9NZ72 180 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 EMCNQ9ULC0 261 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 POLEQ07864 2286 aa13.92□□□□□ -0.18
RTN4-210ENST00000427710 ICE1Q9Y2F5 2266 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 TLDC2A0PJX2 215 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 DYTNA2CJ06 578 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 ESPNB1AK53 854 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 OR4F21O95013 312 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 GBAP04062 536 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 KRT15P19012 456 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 TAC1P20366 129 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 CPN2P22792 545 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 SERPINB1P30740 379 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 HNRNPH2P55795 449 aaKnown RBP13.91□□□□□ -0.18
RTN4-210ENST00000427710 PHEXP78562 749 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 TCHHL1Q5QJ38 904 aaPredicted RBP13.91□□□□□ -0.18
RTN4-210ENST00000427710 ZNF678Q5SXM1 525 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 C18orf63Q68DL7 685 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 H3F3CQ6NXT2 135 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 METTL2BQ6P1Q9 378 aaKnown RBP13.91□□□□□ -0.18
RTN4-210ENST00000427710 ATCAYQ86WG3 371 aa13.91□□□□□ -0.18
RTN4-210ENST00000427710 OR4N5Q8IXE1 308 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms