RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RAD23AP54725 363 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 GP2P55259 537 aaKnown RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 HPCAP84074 193 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 DUSP2Q05923 314 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 KLHL35Q6PF15 583 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 COMTD1Q86VU5 262 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 LACC1Q8IV20 430 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 APLFQ8IW19 511 aaPredicted RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 IQCF1Q8N6M8 205 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 KCT2Q8NC54 265 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 OR8J2Q8NGG1 315 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 B4GALNT2Q8NHY0 566 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 KAT2AQ92830 837 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 DNASE1L2Q92874 299 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 PDXPQ96GD0 296 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 VPS35Q96QK1 796 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 SMAD5Q99717 465 aaKnown RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 ZCCHC2Q9C0B9 1178 aaKnown RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 CD320Q9NPF0 282 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 FAM120CQ9NX05 1096 aaKnown RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 DKK3Q9UBP4 350 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 ABCA7Q8IZY2 2146 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 C1QTNF3-AMACRE9PGA6 284 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 LRRTM2O43300 516 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 ERI3O43414 337 aaKnown RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 NOL3O60936 208 aaKnown RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 COL9A1P20849 921 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 PXNP49023 591 aaPredicted RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 PIN1Q13526 163 aaPredicted RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 SYNPOQ8N3V7 929 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 ZFAND2BQ8WV99 257 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 C11orf24Q96F05 449 aaPredicted RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 C16orf58Q96GQ5 468 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 TEFMQ96QE5 360 aaKnown RBP11.37□□□□□ -0.59
PTPRN-204ENST00000423636 EPB41L1Q9H4G0 881 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 FGF22Q9HCT0 170 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 TMEM74BQ9NUR3 256 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 NTNG1Q9Y2I2 539 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 KCNE3Q9Y6H6 103 aa11.37□□□□□ -0.59
PTPRN-204ENST00000423636 TNRC18O15417 2968 aaPredicted RBP11.36□□□□□ -0.59
PTPRN-204ENST00000423636 IGKV1-8A0A0C4DH67 115 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 TRBC2A0A5B9 178 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 NDUFS4O43181 175 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 PRKNO60260 465 aaPredicted RBP11.36□□□□□ -0.59
PTPRN-204ENST00000423636 RPS3AP61247 264 aaKnown RBP11.36□□□□□ -0.59
PTPRN-204ENST00000423636 MLLT1Q03111 559 aaPredicted RBP11.36□□□□□ -0.59
PTPRN-204ENST00000423636 SPIN4Q56A73 249 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 SYCE2Q6PIF2 218 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 ENPP7Q6UWV6 458 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 CBLL1Q75N03 491 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 SERPINA11Q86U17 422 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 ERI1Q8IV48 349 aaKnown RBP11.36□□□□□ -0.59
PTPRN-204ENST00000423636 LRRC56Q8IYG6 542 aaPredicted RBP11.36□□□□□ -0.59
PTPRN-204ENST00000423636 LGI4Q8N135 537 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 SP7Q8TDD2 431 aaPredicted RBP11.36□□□□□ -0.59
PTPRN-204ENST00000423636 HERVK_113Q902F9 699 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 C7orf34Q96L11 122 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 EHD1Q9H4M9 534 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 ADPRHL2Q9NX46 363 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 BTN3A3O00478 584 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 PVRP15151 417 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 ACSL1P33121 698 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 TRPC1P48995 793 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 MRPL19P49406 292 aaKnown RBP11.36□□□□□ -0.59
PTPRN-204ENST00000423636 NFATC3Q12968 1075 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 ITGADQ13349 1161 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 LASP1Q14847 261 aaKnown RBP11.36□□□□□ -0.59
PTPRN-204ENST00000423636 LTB4RQ15722 352 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 GCNT6Q5T4J0 391 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 ZNF691Q5VV52 312 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 ZNF793Q6ZN11 406 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 PRR23BQ6ZRT6 265 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 EIF3MQ7L2H7 374 aaKnown RBP11.36□□□□□ -0.59
PTPRN-204ENST00000423636 SLC9B2Q86UD5 537 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 CCDC103Q8IW40 242 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 PGBD3Q8N328 593 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 COL21A1Q96P44 957 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 DPH7Q9BTV6 452 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 AICDAQ9GZX7 198 aa11.36□□□□□ -0.59
PTPRN-204ENST00000423636 CLDN24A6NM45 220 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 ABCB7O75027 752 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 CCNA2P20248 432 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 CERS1P27544 350 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 DNAJA1P31689 397 aaKnown RBP11.35□□□□□ -0.59
PTPRN-204ENST00000423636 NPRL3Q12980 569 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 DYNC1I2Q13409 638 aaKnown RBP11.35□□□□□ -0.59
PTPRN-204ENST00000423636 C1orf61Q13536 156 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 PAGE2BQ5JRK9 111 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 SHQ1Q6PI26 577 aaKnown RBP11.35□□□□□ -0.59
PTPRN-204ENST00000423636 TAGAPQ8N103 731 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 SLC15A4Q8N697 577 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 OR10G2Q8NGC3 310 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTPRN-204ENST00000423636 OTUB2Q96DC9 234 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 SGPP1Q9BX95 441 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 RBCK1Q9BYM8 510 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 TAS2R9Q9NYW1 312 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 TRBV4-1A0A0J9YWV2 114 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 C5orf58C9J3I9 102 aa11.35□□□□□ -0.59
PTPRN-204ENST00000423636 BCAS1O75363 584 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms