RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 OR7A17O14581 309 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 VPS4BO75351 444 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 SUPT7LO94864 414 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 SORBS2O94875 1100 aaKnown RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 TBX6O95947 436 aaPredicted RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 SHBGP04278 402 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 CELA2AP08217 269 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 RPS17P08708 135 aaKnown RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 MAOAP21397 527 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 HIST1H1TP22492 207 aaPredicted RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 ATP5F1P24539 256 aaPredicted RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 ATP5A1P25705 553 aaKnown RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 TLX1P31314 330 aaPredicted RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 SOX11P35716 441 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 HSD17B3P37058 310 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 CD97P48960 835 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 ARFIP1P53367 373 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 RPS13P62277 151 aaKnown RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 HERVK_113P63132 956 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 BTG2P78543 158 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 TLR1Q15399 786 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 FRG2Q64ET8 278 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 OR4C11Q6IEV9 310 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 IGFL2Q6UWQ7 119 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 Q6ZS92 163 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 MILR1Q7Z6M3 343 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 ACOT4Q8N9L9 421 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 FAM47BQ8NA70 645 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 C7orf57Q8NEG2 295 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 OR52B6Q8NGF0 335 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 CCDC126Q96EE4 140 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 ZNF354BQ96LW1 612 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 CDK15Q96Q40 435 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 FRG2BQ96QU4 278 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 SERPINI1Q99574 410 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 TMUB1Q9BVT8 246 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 C1QTNF3Q9BXJ4 246 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 ERVK-6Q9BXR3 956 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 SLC29A3Q9BZD2 475 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 ZBTB20Q9HC78 741 aaPredicted RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 MMP25Q9NPA2 562 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 PRDM7Q9NQW5 492 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 MS4A12Q9NXJ0 267 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 PHF11Q9UIL8 331 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 VPS4AQ9UN37 437 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 STK38LQ9Y2H1 464 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 CCDC88CQ9P219 2028 aa10.27□□□□□ -0.77
USP49-204ENST00000423567 FASNP49327 2511 aaKnown RBP10.27□□□□□ -0.77
USP49-204ENST00000423567 MED13Q9UHV7 2174 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 BOD1L1Q8NFC6 3051 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 TCRBV16S1A1N1A0A5B0 115 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 TLDC2A0PJX2 215 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 FOXE1O00358 373 aaPredicted RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 COPEO14579 308 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 SCELO95171 688 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 IFNA16P05015 189 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 SBK3P0C264 359 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 MYL2P10916 166 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 CPN2P22792 545 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 NEK2P51955 445 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 CDH13P55290 713 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 SLC26A5P58743 744 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 CLCQ05315 142 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 ZNF33BQ06732 778 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 STX4Q12846 297 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 TRAF3Q13114 568 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 CUL3Q13618 768 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 ZNF169Q14929 603 aaPredicted RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 RASA2Q15283 850 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 INPP5JQ15735 1006 aaPredicted RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 MEP1AQ16819 746 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 CCDC153Q494R4 210 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 PLEKHN1Q494U1 663 aaPredicted RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 GGTA1PQ4G0N0 100 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 B3GNTL1Q67FW5 361 aaPredicted RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 WDR93Q6P2C0 686 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 CYP20A1Q6UW02 462 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 ZNF793Q6ZN11 406 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 UBE3DQ7Z6J8 389 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 CLNKQ7Z7G1 428 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 NUDT13Q86X67 352 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 SCUBE1Q8IWY4 988 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 RIBC1Q8N443 379 aaPredicted RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 TMEM151AQ8N4L1 468 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 SLC5A8Q8N695 610 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 CCDC63Q8NA47 563 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 OR4F6Q8NGB9 312 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 SUN3Q8TAQ9 357 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 EPS8L3Q8TE67 593 aaKnown RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 TRPC4APQ8TEL6 797 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 ZNF483Q8TF39 744 aaPredicted RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 MZB1Q8WU39 189 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 PSMF1Q92530 271 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 MTFMTQ96DP5 389 aaKnown RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 NSUN5Q96P11 429 aaKnown RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 IQCGQ9H095 443 aaKnown RBP10.26□□□□□ -0.77
USP49-204ENST00000423567 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP49-204ENST00000423567 CLMPQ9H6B4 373 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 ZBTB26Q9HCK0 441 aa10.26□□□□□ -0.77
USP49-204ENST00000423567 NECTIN3Q9NQS3 549 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms