RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 CADM4Q8NFZ8 388 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 HEXDCQ8WVB3 486 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 LPGAT1Q92604 370 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 SARAFQ96BY9 339 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 ZBTB9Q96C00 473 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 BIRC7Q96CA5 298 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 MTBPQ96DY7 904 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 PGM2Q96G03 612 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 DCUN1D1Q96GG9 259 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 VPS39Q96JC1 886 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 PKNOX2Q96KN3 472 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 BIRC8Q96P09 236 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 COPS8Q99627 209 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 SH3GL2Q99962 352 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 CLPBQ9H078 707 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 CENPHQ9H3R5 247 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 RHOJQ9H4E5 214 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 EBF2Q9HAK2 575 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 TMBIM4Q9HC24 238 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 FZD3Q9NPG1 666 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 IFT80Q9P2H3 777 aaPredicted RBP5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 CTNNAL1Q9UBT7 734 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 TBK1Q9UHD2 729 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 CORO1CQ9ULV4 474 aaPredicted RBP5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 B3GNT3Q9Y2A9 372 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 DMRT1Q9Y5R6 373 aa5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 COPG1Q9Y678 874 aaKnown RBP5.69□□□□□ -1.5
NIFKP3-201ENST00000417799 TRIM49D1C9J1S8 452 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 PRAMEF26H0Y7S4 382 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CYR61O00622 381 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 PRYO14603 147 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 INPP4BO15327 924 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 MTX2O75431 263 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CDK14O94921 469 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 AP2A2O94973 939 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 MT-ND3P03897 115 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 HOXC4P09017 264 aaPredicted RBP5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 ATP1B2P14415 290 aaPredicted RBP5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 PKMP14618 531 aaKnown RBP5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CHN1P15882 459 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 IGFBP2P18065 325 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CD53P19397 219 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 MSH3P20585 1137 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 BCKDHBP21953 392 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CD27P26842 260 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 FMO4P31512 558 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 HOXD12P35452 270 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 NSG1P42857 185 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CLDN2P57739 230 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CDK3Q00526 305 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 B4GALNT1Q00973 533 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 TMEM115Q12893 351 aaPredicted RBP5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 DNAJC3Q13217 504 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 ZNF528Q3MIS6 628 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 TNFAIP8L3Q5GJ75 292 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CTSL3PQ5NE16 218 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 AGBL2Q5U5Z8 902 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 ZNF549Q6P9A3 640 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 PCSK4Q6UW60 755 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 MACC1Q6ZN28 852 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 TIFABQ6ZNK6 161 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 TRIM74Q86UV6 250 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 HEATR4Q86WZ0 1026 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 GALNT4Q8N4A0 578 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 DCLK2Q8N568 766 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 DEFB119Q8N690 84 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CLDN19Q8N6F1 224 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 GPATCH11Q8N954 259 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 NELL1Q92832 810 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 ATXN7L3BQ96GX2 97 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 COX14Q96I36 57 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 ELMO2Q96JJ3 720 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 SERAC1Q96JX3 654 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 BMFQ96LC9 184 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 GPR22Q99680 433 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 NPAS1Q99742 590 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 APOOQ9BUR5 198 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 STMN4Q9H169 189 aaPredicted RBP5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 OR2AG1Q9H205 316 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 P2RY12Q9H244 342 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CCDC68Q9H2F9 335 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 WDR26Q9H7D7 661 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 SYNPO2LQ9H987 977 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 PHPT1Q9NRX4 125 aaPredicted RBP5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 SEMA4GQ9NTN9 838 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 ZNF69Q9UC07 566 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 SLC13A4Q9UKG4 626 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 CA5BQ9Y2D0 317 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 OR1A2Q9Y585 309 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 SIRT4Q9Y6E7 314 aaPredicted RBP5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 PRSS21Q9Y6M0 314 aa5.68□□□□□ -1.5
NIFKP3-201ENST00000417799 SCN8AQ9UQD0 1980 aa5.67□□□□□ -1.5
NIFKP3-201ENST00000417799 PLXNA2O75051 1894 aa5.67□□□□□ -1.5
NIFKP3-201ENST00000417799 A0A1W2PPM1 405 aa5.67□□□□□ -1.5
NIFKP3-201ENST00000417799 SAC3D1A6NKF1 404 aa5.67□□□□□ -1.5
NIFKP3-201ENST00000417799 MEI4A8MW99 385 aa5.67□□□□□ -1.5
NIFKP3-201ENST00000417799 FOXO6A8MYZ6 492 aa5.67□□□□□ -1.5
NIFKP3-201ENST00000417799 GPR89AB7ZAQ6 455 aa5.67□□□□□ -1.5
NIFKP3-201ENST00000417799 H3BMM5 538 aa5.67□□□□□ -1.5
NIFKP3-201ENST00000417799 CACNB4O00305 520 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms