RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 MND1Q9BWT6 205 aa10.84□□□□□ -0.67
PRPF40A-202ENST00000410080 SLAMF7Q9NQ25 335 aa10.84□□□□□ -0.67
PRPF40A-202ENST00000410080 SLC17A6Q9P2U8 582 aa10.84□□□□□ -0.67
PRPF40A-202ENST00000410080 IL1AP01583 271 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 SRPRAP08240 638 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 THBS2P35442 1172 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 ASPAP45381 313 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 SLAMF1Q13291 335 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TMEM201Q5SNT2 666 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 OR4K14Q8NGD5 310 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 MFSD8Q8NHS3 518 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TFAP2BQ92481 460 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 LENG8Q96PV6 779 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 PHB2Q99623 299 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 ZNF442Q9H7R0 627 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 EIF2B3Q9NR50 452 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 SOCS2O14508 198 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TNFRSF8P28908 595 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 L1CAMP32004 1257 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 HSD11B2P80365 405 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 PON3Q15166 354 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 RNF130Q86XS8 419 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 CBR4Q8N4T8 237 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 OR9A1PQ8NGU1 263 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 PROKR1Q8TCW9 393 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 NANOS1Q8WY41 292 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 DGCR14Q96DF8 476 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 SLC25A44Q96H78 314 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 APOBEC3BQ9UH17 382 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 RAB21Q9UL25 225 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 RPL36Q9Y3U8 105 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TLL2Q9Y6L7 1015 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 FAM237AA0A1B0GTK4 181 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 VSTM2BA6NLU5 285 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 STK17BO94768 372 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 S100PP25815 95 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 DPP6P42658 865 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 MED1Q15648 1581 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 ATAD3CQ5T2N8 411 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 STOML3Q8TAV4 291 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TM9SF4Q92544 642 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 EDARQ9UNE0 448 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 LRCH4O75427 683 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 ETV5P41161 510 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 CCNHP51946 323 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TMBIM6P55061 237 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 KCNC4Q03721 635 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 PAMR1Q6UXH9 720 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 ALG3Q92685 438 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 FAM117AQ9C073 453 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 ACSS3Q9H6R3 686 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 THUMPD1Q9NXG2 353 aaKnown RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 PDE10AQ9Y233 779 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 MYOM1P52179 1685 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 NUP214P35658 2090 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TVP23AA6NH52 213 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TLR4O00206 839 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 HAS3O00219 553 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 S1PR1P21453 382 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 RFC2P35250 354 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TMEM44Q2T9K0 475 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TPRG1LQ5T0D9 272 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 LANCL3Q6ZV70 420 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 MARCH9Q86YJ5 346 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 HOXB13Q92826 284 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 DHDHQ9UQ10 334 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 PCDHGA10Q9Y5H3 936 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 ROBO3Q96MS0 1386 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 ATRNO75882 1429 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 MATN2O00339 956 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 COL6A2P12110 1019 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 CDKN2BP42772 138 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 VMACQ2NL98 169 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 HMBOX1Q6NT76 420 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TOMM5Q8N4H5 51 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 NEDD4LQ96PU5 975 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 CDH20Q9HBT6 801 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 PCDH10Q9P2E7 1040 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 DNAJB11Q9UBS4 358 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 RNF215Q9Y6U7 377 aa10.83□□□□□ -0.68
PRPF40A-202ENST00000410080 TRAV6A0A075B6T7 132 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 BCAS1O75363 584 aaPredicted RBP10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 CNTN5O94779 1100 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 MMP8P22894 467 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 HERVK_113P63132 956 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 PPA1Q15181 289 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 SEC23BQ15437 767 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 TXNDC5Q8NBS9 432 aaKnown RBP10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 HHIPQ96QV1 700 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 ERVK-6Q9BXR3 956 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 RHCGQ9UBD6 479 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 IGLON5A6NGN9 336 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 SNX3O60493 162 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 PNMTP11086 282 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 IDH3AP50213 366 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 KLF10Q13118 480 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 ATXN7L3Q14CW9 347 aaPredicted RBP10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 TMEM69Q5SWH9 247 aa10.82□□□□□ -0.68
PRPF40A-202ENST00000410080 PLXDC1Q8IUK5 500 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms