RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 LOC102723996A0A087X1L8 192 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 IGHV1-45A0A0A0MS14 117 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 IGHV3-20A0A0C4DH32 117 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 PRMT3O60678 531 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 EEDO75530 441 aaKnown RBP22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 BPGMP07738 259 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 CYC1P08574 325 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 MAOAP21397 527 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 BSGP35613 385 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 TSFMP43897 325 aaKnown RBP22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 HNRNPFP52597 415 aaKnown RBP22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 RAPSNQ13702 412 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 MPP2Q14168 576 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 ZCCHC23Q6ZST2 131 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 ANKRD37Q7Z713 158 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 PTCHD1Q96NR3 888 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 MRPL1Q9BYD6 325 aaKnown RBP22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 ADNPQ9H2P0 1102 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 ZNF160Q9HCG1 818 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 LYRM4Q9HD34 91 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 ATP13A2Q9NQ11 1180 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 FBXW2Q9UKT8 454 aa22.43■■□□□ 1.18
UBE2E3-202ENST00000410062 MKRN2OSH3BPM6 223 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 PCDH17O14917 1159 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 ULK1O75385 1050 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 ARFIP1P53367 373 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 QSOX2Q6ZRP7 698 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 NDUFAF7Q7L592 441 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 AMER2Q8N7J2 671 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 LSM14AQ8ND56 463 aaKnown RBP22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 CNDP1Q96KN2 507 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 PKNOX2Q96KN3 472 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 BRF2Q9HAW0 419 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 BSNQ9UPA5 3926 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 NSG1A0A0A6YYJ2 146 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 CYR61O00622 381 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 SEMA3DO95025 777 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 HPP00738 406 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 GBAP04062 536 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 AIMP2Q13155 320 aaKnown RBP22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 PCOLCEQ15113 449 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 SCIMPQ6UWF3 145 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 CPEB2Q7Z5Q1 589 aaKnown RBP22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 PARP9Q8IXQ6 854 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 ZCCHC7Q8N3Z6 543 aaKnown RBP22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 GALNT16Q8N428 558 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 FDCSPQ8NFU4 85 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 ADAMTS18Q8TE60 1221 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 ZNF700Q9H0M5 742 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 DDX31Q9H8H2 851 aaKnown RBP22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 NECTIN3Q9NQS3 549 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 PRDM9Q9NQV7 894 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 C19orf25Q9UFG5 118 aaPredicted RBP22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 TUBD1Q9UJT1 453 aa22.42■■□□□ 1.18
UBE2E3-202ENST00000410062 A0A1W2PQ72 361 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 WDR91A4D1P6 747 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 K7EM74 188 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 TM9SF1O15321 606 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 CRCPO75575 148 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 CHN1P15882 459 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 SERPINB3P29508 390 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 SERPINB4P48594 390 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 Q0VFX4 171 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 NUDT13Q86X67 352 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 EFCAB3Q8N7B9 438 aa22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 ZNF71Q9NQZ8 489 aaPredicted RBP22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 MRPS33Q9Y291 106 aaKnown RBP22.41■■□□□ 1.18
UBE2E3-202ENST00000410062 A0A0A6YYD5 115 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 H3BQF6 201 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 TMPRSS11DO60235 418 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 NPHS1O60500 1241 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 CEACAM4O75871 244 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 SEC24DO94855 1032 aaPredicted RBP22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 CHRNGP07510 517 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 NR1D1P20393 614 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 ITGA3P26006 1051 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 HNRNPH2P55795 449 aaKnown RBP22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 MAGOHP61326 146 aaKnown RBP22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 RCN2Q14257 317 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 CYP20A1Q6UW02 462 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 CUZD1Q86UP6 607 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 NUDCD3Q8IVD9 361 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 METTL4Q8N3J2 472 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 C9orf43Q8TAL5 461 aaPredicted RBP22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 SREK1Q8WXA9 508 aaKnown RBP22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 TRMOQ9BU70 441 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 SLC25A23Q9BV35 468 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 PRTFDC1Q9NRG1 225 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 SPACA6W5XKT8 324 aa22.4■■□□□ 1.18
UBE2E3-202ENST00000410062 CLDN4O14493 209 aa22.39■■□□□ 1.18
UBE2E3-202ENST00000410062 ZWINTO95229 277 aa22.39■■□□□ 1.18
UBE2E3-202ENST00000410062 PRB1P04280 392 aa22.39■■□□□ 1.18
UBE2E3-202ENST00000410062 KLK1P06870 262 aa22.39■■□□□ 1.18
UBE2E3-202ENST00000410062 HSD3B1P14060 373 aa22.39■■□□□ 1.18
UBE2E3-202ENST00000410062 CPN2P22792 545 aa22.39■■□□□ 1.18
UBE2E3-202ENST00000410062 HSD3B2P26439 372 aa22.39■■□□□ 1.18
UBE2E3-202ENST00000410062 TBL3Q12788 808 aaKnown RBP22.39■■□□□ 1.18
UBE2E3-202ENST00000410062 CSTF3Q12996 717 aaKnown RBP22.39■■□□□ 1.18
UBE2E3-202ENST00000410062 SLC13A2Q13183 592 aa22.39■■□□□ 1.18
UBE2E3-202ENST00000410062 SFT2D3Q587I9 215 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms