RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ESAMQ96AP7 390 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 TMEM125Q96AQ2 219 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 NXNL1Q96CM4 212 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 REPS1Q96D71 796 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 VMP1Q96GC9 406 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 C16orf45Q96MC5 204 aaPredicted RBP13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 CCDC77Q9BR77 488 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 RBCK1Q9BYM8 510 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 AICDAQ9GZX7 198 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 NECTIN3Q9NQS3 549 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 LRFN1Q9P244 771 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 SEC14L3Q9UDX4 400 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 VTI1BQ9UEU0 232 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 ANGPTL3Q9Y5C1 460 aa13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 UTP20O75691 2785 aaKnown RBP13.6□□□□□ -0.23
NIF3L1-205ENST00000409588 CPAMD8Q8IZJ3 1885 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 SPTBN1Q01082 2364 aaKnown RBP13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 HIVEP3Q5T1R4 2406 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 A0A096LPK6 155 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 ESYT3A0FGR9 886 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 ASPDHA6ND91 283 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 SUPT3HB4E1H0 165 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 CYR61O00622 381 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 KLK8O60259 260 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 PRAMEF4O60810 478 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 SUPT3HO75486 399 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 KRT38O76015 456 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 SCELO95171 688 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 TBX6O95947 436 aaPredicted RBP13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 RBP1P09455 135 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 CTAGE8P0CG41 777 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 COL6A2P12110 1019 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 MTHFD2P13995 350 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 PTX3P26022 381 aaPredicted RBP13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 MSH2P43246 934 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 SERPINB8P50452 374 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 HLCSP50747 726 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 CASP6P55212 293 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 LIM2P55344 173 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 PHEXP78562 749 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 OC90Q02509 493 aaPredicted RBP13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 DLG1Q12959 904 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 PCBP2Q15366 365 aaKnown RBP eCLIP13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 ELAVL1Q15717 326 aaKnown RBP13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 C10orf62Q5T681 223 aaPredicted RBP13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 DEPDC1Q5TB30 811 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 LGSNQ5TDP6 509 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 PRAMEF9Q5VWM5 478 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 GFRALQ6UXV0 394 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 VN1R5Q7Z5H4 357 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 CTAGE4Q8IX94 777 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 SHISA5Q8N114 240 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 SLC34A3Q8N130 599 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 POGLUT1Q8NBL1 392 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 MORN4Q8NDC4 146 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 OR7G3Q8NG95 312 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 NPAS2Q99743 824 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 ADAP2Q9NPF8 381 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 SNX15Q9NRS6 342 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 CLCA3PQ9Y6N3 262 aa13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 SPTAN1Q13813 2472 aaKnown RBP13.59□□□□□ -0.23
NIF3L1-205ENST00000409588 DOPEY1Q5JWR5 2465 aa13.58□□□□□ -0.23
NIF3L1-205ENST00000409588 H0YIV9 168 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 KLRC4-KLRK1H3BQV0 150 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 UBXN8O00124 270 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 NEURL1O76050 574 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 ZFAND5O76080 213 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 F10P00742 488 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 INHBAP08476 426 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 GFAPP14136 432 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 EPORP19235 508 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 CD22P20273 847 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 TLX1P31314 330 aaPredicted RBP13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 STX4Q12846 297 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 SETDB1Q15047 1291 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 FCRLBQ6BAA4 426 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 SPINK14Q6IE38 97 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 GRHL2Q6ISB3 625 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 BNC2Q6ZN30 1099 aaPredicted RBP13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 GPALPP1Q8IXQ4 340 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 CENPLQ8N0S6 344 aaPredicted RBP13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 APCDD1LQ8NCL9 501 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 OR8K3Q8NH51 312 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 RGMAQ96B86 450 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 SIGLEC12Q96PQ1 595 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 F2RL3Q96RI0 385 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 FMO2Q99518 471 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 MS4A8Q9BY19 250 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 KCMF1Q9P0J7 381 aa13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 YARS2Q9Y2Z4 477 aaKnown RBP13.58□□□□□ -0.24
NIF3L1-205ENST00000409588 HMX2A2RU54 273 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 C4orf51C9J302 202 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 MYO1DO94832 1006 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 UNC5CO95185 931 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 HIST1H1TP22492 207 aaPredicted RBP13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 ATP5A1P25705 553 aaKnown RBP13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 TPP2P29144 1249 aaPredicted RBP13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 PPP2R1BP30154 601 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 GPR143P51810 404 aa13.57□□□□□ -0.24
NIF3L1-205ENST00000409588 ALDH6A1Q02252 535 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms