RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SLC29A4Q7RTT9 530 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 CLEC14AQ86T13 490 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 APIPQ96GX9 242 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 PDLIM5Q96HC4 596 aaKnown RBP13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 UBXN10Q96LJ8 280 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 PIP5K1AQ99755 562 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 MND1Q9BWT6 205 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 NLGN3Q9NZ94 848 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 MAP10Q9P2G4 905 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 RTCAO00442 366 aaKnown RBP13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 LAMP1P11279 417 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 GABRB3P28472 473 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 LBX1P52954 281 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 AAK1Q2M2I8 961 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 CMPK2Q5EBM0 449 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 TCEANCQ8N8B7 351 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 NTMT1Q9BV86 223 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 RC3H2Q9HBD1 1191 aaKnown RBP13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 ZNF334Q9HCZ1 680 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 AREL1O15033 823 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 LILRB3O75022 631 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 ZNF821O75541 412 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 CFIP05156 583 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 LINGO3P0C6S8 592 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 PRDX3P30048 256 aaKnown RBP13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 ELOCQ15369 112 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 PAGE3Q5JUK9 113 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 ZIC5Q96T25 663 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 TBX5Q99593 518 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 EPYCQ99645 322 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 ARMC1Q9NVT9 282 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 ZNF860A6NHJ4 632 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 HTRA3P83110 453 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 ID2Q02363 134 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 DEFB134Q4QY38 66 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 CATSPEREQ5SY80 951 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 PAMR1Q6UXH9 720 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 LIPIQ6XZB0 460 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 HSD11B1LQ7Z5J1 315 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 CLECL1Q8IZS7 167 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 SHKBP1Q8TBC3 707 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 OSTF1Q92882 214 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 TRNT1Q96Q11 434 aaKnown RBP13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 CDCA3Q99618 268 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 KATNBL1Q9H079 304 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 SOX17Q9H6I2 414 aaPredicted RBP13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 CWH43Q9H720 699 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 RMI1Q9H9A7 625 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 COMMD3Q9UBI1 195 aa13.65□□□□□ -0.22
PCDHGA11-201ENST00000398587 TCRBV21S2A2A0A5A6 115 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 AXIN1O15169 862 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 CPNE3O75131 537 aaKnown RBP13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 DNAJB5O75953 348 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 CH25HO95992 272 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 TGFBR2P37173 567 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 FCHO2Q0JRZ9 810 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 E2F2Q14209 437 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 PHOSPHO2Q8TCD6 241 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 DPH2Q9BQC3 489 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 C14orf105Q9NVL8 296 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 HCN3Q9P1Z3 774 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 EVPLQ92817 2033 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 A0A1W2PPW3 197 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 FAAHO00519 579 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 DNASE1L1P49184 302 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 RPS15AP62244 130 aaKnown RBP13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 TSTQ16762 297 aaKnown RBP13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 ARHGAP40Q5TG30 622 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 MEDAGQ5VYS4 303 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 MEIOBQ8N635 442 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 NUP43Q8NFH3 380 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 CNDP2Q96KP4 475 aaKnown RBP13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 SMIM14Q96QK8 99 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 GPER1Q99527 375 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF696Q9H7X3 374 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 TCF7L1Q9HCS4 588 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 GIN1Q9NXP7 522 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 CEBPBP17676 345 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 HLA-FP30511 346 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 AP3S2P59780 193 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 PPP2R2BQ00005 443 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 ZNF234Q14588 700 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR52N2Q8NGI0 321 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 TMEM125Q96AQ2 219 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 TCEAL4Q96EI5 215 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 BRF2Q9HAW0 419 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 TMEM181Q9P2C4 612 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 SERTAD3Q9UJW9 196 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 CYP8B1Q9UNU6 501 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 OR1A2Q9Y585 309 aa13.64□□□□□ -0.23
PCDHGA11-201ENST00000398587 IGLV3-10A0A075B6K4 115 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PPP6CO00743 305 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 RETP07949 1114 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 TACSTD2P09758 323 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 PABPC4LP0CB38 370 aaKnown RBP13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 IFI30P13284 250 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 ELK4P28324 431 aa13.63□□□□□ -0.23
PCDHGA11-201ENST00000398587 VSX2P58304 361 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms