RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 FAM199XQ6PEV8 388 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 COX15Q7KZN9 410 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 SPATA21Q7Z572 469 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 SPATA19Q7Z5L4 167 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 NLGN4XQ8N0W4 816 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 ESX1Q8N693 406 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 EFCAB3Q8N7B9 438 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 NLGN4YQ8NFZ3 816 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 OR51Q1Q8NH59 317 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 STON2Q8WXE9 905 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 GATA6Q92908 595 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 CHST8Q9H2A9 424 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 NOP53Q9NZM5 478 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 DAPP1Q9UN19 280 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 MAP4K5Q9Y4K4 846 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 ASB4Q9Y574 426 aa22.31■■□□□ 1.16
TSPAN4-203ENST00000397397 RAD1O60671 282 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 ONECUT2O95948 504 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 BCKDHAP12694 445 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 RNH1P13489 461 aaKnown RBP22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 HNRNPH2P55795 449 aaKnown RBP22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 RAB38P57729 211 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 ZNF763Q0D2J5 394 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 GPR180Q86V85 440 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 SHISA5Q8N114 240 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 LIX1Q8N485 282 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 CDC26Q8NHZ8 85 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 C16orf78Q8WTQ4 265 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 PEX11GQ96HA9 241 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 KCMF1Q9P0J7 381 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 PHF11Q9UIL8 331 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 SPACA6W5XKT8 324 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 SEC16AO15027 2179 aa22.3■■□□□ 1.16
TSPAN4-203ENST00000397397 E9PBE3 544 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 PSMD12O00232 456 aaPredicted RBP22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 KLHL41O60662 606 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 PRPS2P11908 318 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 ACPPP15309 386 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 SDC1P18827 310 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 CPN2P22792 545 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 TRA2BP62995 288 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 MLIPQ5VWP3 458 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 TMEM198Q66K66 360 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 PARP9Q8IXQ6 854 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 C10orf82Q8WW14 230 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 TM4SF18Q96CE8 201 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 ZNF578Q96N58 590 aaPredicted RBP22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 ASIC5Q9NY37 505 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 BAIAP2L1Q9UHR4 511 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 GPN3Q9UHW5 284 aaPredicted RBP22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 G3BP2Q9UN86 482 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 ATG4BQ9Y4P1 393 aa22.29■■□□□ 1.16
TSPAN4-203ENST00000397397 C9J4A7 227 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 GUCY1B2O75343 617 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 ALDOCP09972 364 aaKnown RBP22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 TACR1P25103 407 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 XCR1P46094 333 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 DIO3P55073 304 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 TAS2R50P59544 299 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 UNQ6494/PRO21346Q6UXR6 183 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 ZNF517Q6ZMY9 492 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 RIPOR1Q6ZS17 1223 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 OVCH1Q7RTY7 1134 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 FAM47BQ8NA70 645 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 MARK4Q96L34 752 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 TSSK3Q96PN8 268 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 CCT8L2Q96SF2 557 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 RBCK1Q9BYM8 510 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 MKKSQ9NPJ1 570 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 TEX10Q9NXF1 929 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 MS4A12Q9NXJ0 267 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 CTSFQ9UBX1 484 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 ZNF282Q9UDV7 671 aaPredicted RBP22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 ACSL6Q9UKU0 697 aa22.28■■□□□ 1.16
TSPAN4-203ENST00000397397 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 UBDO15205 165 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 SNX3O60493 162 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 G6PDP11413 515 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 GSTM5P46439 218 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 OCA2Q04671 838 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 TBC1D25Q3MII6 688 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 FAM198BQ6UWH4 519 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 CACNA2D3Q8IZS8 1091 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 CLHC1Q8NHS4 586 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 ADAMTS18Q8TE60 1221 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 FKBP10Q96AY3 582 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 CSF3RQ99062 836 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 MYNNQ9NPC7 610 aa22.27■■□□□ 1.16
TSPAN4-203ENST00000397397 SCN2AQ99250 2005 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 A0A1W2PR48 441 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 FAM227AF5H4B4 570 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 PROM1O43490 865 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 IL3P08700 152 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 TLX1P31314 330 aaPredicted RBP22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 BUD31P41223 144 aaPredicted RBP22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 TNFRSF17Q02223 184 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 ERV3-1Q14264 604 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 C18orf63Q68DL7 685 aa22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 ZC3H7AQ8IWR0 971 aaKnown RBP22.26■■□□□ 1.15
TSPAN4-203ENST00000397397 TMEM132CQ8N3T6 1108 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms