RNA–Protein interactions for RNA: ENST00000389641.8

CCDC57-202, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-202ENST00000389641 TCEANCQ8N8B7 351 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 POF1BQ8WVV4 589 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 KLHL6Q8WZ60 621 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 POP5Q969H6 163 aaKnown RBP12.88□□□□□ -0.35
CCDC57-202ENST00000389641 GPR63Q9BZJ6 419 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 TMEM245Q9H330 911 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 CNOT2Q9NZN8 540 aaKnown RBP12.88□□□□□ -0.35
CCDC57-202ENST00000389641 SH3BP4Q9P0V3 963 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 ACSL6Q9UKU0 697 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 GBF1Q92538 1859 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 CCDC88CQ9P219 2028 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 RRN3P2A6NIE6 340 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 KPNA5O15131 536 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 ORC5O43913 435 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 LZTS3O60299 673 aaPredicted RBP12.88□□□□□ -0.35
CCDC57-202ENST00000389641 SERPINI2O75830 405 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 GADD45GO95257 159 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 AMD1P17707 334 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 IL32P24001 234 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 INSL4Q14641 139 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 UPP1Q16831 310 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 ATXN7L2Q5T6C5 722 aaPredicted RBP12.88□□□□□ -0.35
CCDC57-202ENST00000389641 TYW3Q6IPR3 259 aaKnown RBP12.88□□□□□ -0.35
CCDC57-202ENST00000389641 TRIM69Q86WT6 500 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 TAGAPQ8N103 731 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 CARNMT1Q8N4J0 409 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 FAM181AQ8N9Y4 354 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 OR4K1Q8NGD4 311 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 OR6K2Q8NGY2 324 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 CEP76Q8TAP6 659 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 ACER3Q9NUN7 267 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 ASIC5Q9NY37 505 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 PCDHB9Q9Y5E1 797 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 PCDHB11Q9Y5F2 797 aa12.88□□□□□ -0.35
CCDC57-202ENST00000389641 C2orf78A6NCI8 922 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 TEX46H3BTG2 121 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 TLR4O00206 839 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 HOXD9P28356 352 aaPredicted RBP12.87□□□□□ -0.35
CCDC57-202ENST00000389641 RAB8AP61006 207 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 RPS24P62847 133 aaKnown RBP12.87□□□□□ -0.35
CCDC57-202ENST00000389641 RHAGQ02094 409 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 VEZF1Q14119 521 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 IFI44LQ53G44 452 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 CHMP1BQ7LBR1 199 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 TTC9BQ8N6N2 239 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 NFKBIDQ8NI38 313 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.87□□□□□ -0.35
CCDC57-202ENST00000389641 MSLNLQ96KJ4 702 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 HDHD2Q9H0R4 259 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 ATG10Q9H0Y0 220 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 NMNAT1Q9HAN9 279 aaPredicted RBP12.87□□□□□ -0.35
CCDC57-202ENST00000389641 NDUFB11Q9NX14 153 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 ELF5Q9UKW6 265 aaPredicted RBP12.87□□□□□ -0.35
CCDC57-202ENST00000389641 A0A0A6YYJ9 748 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 PRAMEF33A0A0G2JMD5 474 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 SMIM35A0A1B0GVV1 85 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 LINC00862A6NCI5 91 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 CASKO14936 926 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 PRAMEF10O60809 474 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 PRAMEF4O60810 478 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 TRBC1P01850 177 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 RPIAP49247 311 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 CLDN20P56880 219 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 PRAMEF9Q5VWM5 478 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 ADNP2Q6IQ32 1131 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 C11orf65Q8NCR3 313 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 OR5AK3PQ8NH89 298 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 GATAD2BQ8WXI9 593 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 ST8SIA2Q92186 375 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 SIPA1Q96FS4 1042 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 TOE1Q96GM8 510 aaKnown RBP12.87□□□□□ -0.35
CCDC57-202ENST00000389641 ASB8Q9H765 288 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 PDFQ9HBH1 243 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 FAM105AQ9NUU6 356 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 FAM8A1Q9UBU6 413 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 SLC22A14Q9Y267 594 aa12.87□□□□□ -0.35
CCDC57-202ENST00000389641 DOCK4Q8N1I0 1966 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 PRAMEF1O95521 474 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 PRPS1L1P21108 318 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 ITGB7P26010 798 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 AANATQ16613 207 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 HKDC1Q2TB90 917 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 FAM180BQ6P0A1 224 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 BRAT1Q6PJG6 821 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 SHFQ7M4L6 423 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 FAM46DQ8NEK8 389 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 TM9SF4Q92544 642 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 FBXW5Q969U6 566 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 METTL2AQ96IZ6 378 aaKnown RBP12.86□□□□□ -0.35
CCDC57-202ENST00000389641 SLC6A18Q96N87 628 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 MGME1Q9BQP7 344 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 DUSP26Q9BV47 211 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 TSSK6Q9BXA6 273 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 SLC29A3Q9BZD2 475 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 MS4A7Q9GZW8 240 aaPredicted RBP12.86□□□□□ -0.35
CCDC57-202ENST00000389641 ERVMER34-1Q9H9K5 563 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 SLC28A3Q9HAS3 691 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 MARCH2Q9P0N8 246 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 RAB23Q9ULC3 237 aa12.86□□□□□ -0.35
CCDC57-202ENST00000389641 ZAR1LA6NP61 321 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms