RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 SF1Q15637 639 aaKnown RBP14.35□□□□□ -0.11
CTNS-202ENST00000381870 ZNF730Q6ZMV8 503 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 NAGSQ8N159 534 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 DNAJB3Q8WWF6 145 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 MARC2Q969Z3 335 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 SORCS2Q96PQ0 1159 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 SOSTQ9BQB4 213 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 PIGUQ9H490 435 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 PCDHB11Q9Y5F2 797 aa14.35□□□□□ -0.11
CTNS-202ENST00000381870 QSOX1O00391 747 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 MPZL2O60487 215 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 C1SP09871 688 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 COX7A2P14406 83 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 INPP1P49441 399 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 TBX4P57082 545 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 ABRQ12979 859 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 ARHGEF7Q14155 803 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 SF3A2Q15428 464 aaKnown RBP14.34□□□□□ -0.11
CTNS-202ENST00000381870 SNAPC1Q16533 368 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 ZNF57Q68EA5 555 aaPredicted RBP14.34□□□□□ -0.11
CTNS-202ENST00000381870 FAM46DQ8NEK8 389 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 OR11H7Q8NGC8 314 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 CEP76Q8TAP6 659 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 SLC6A18Q96N87 628 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 KCNJ15Q99712 375 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 MAPKAP1Q9BPZ7 522 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 SLC29A3Q9BZD2 475 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 ELOVL6Q9H5J4 265 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 CDCP1Q9H5V8 836 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 FZD3Q9NPG1 666 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 ACER3Q9NUN7 267 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 NCKAP1Q9Y2A7 1128 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 LTBP3Q9NS15 1303 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 ALPK3Q96L96 1907 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 A0A0D9SEW6 157 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 PRAMEF33A0A0G2JMD5 474 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 PRAMEF10O60809 474 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 MPC2O95563 127 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 LAMP1P11279 417 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 STK19P49842 368 aaPredicted RBP14.34□□□□□ -0.11
CTNS-202ENST00000381870 RPS25P62851 125 aaKnown RBP14.34□□□□□ -0.11
CTNS-202ENST00000381870 IFI44LQ53G44 452 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 CLLU1Q5K131 121 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 BCL2L15Q5TBC7 163 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 SDHAF4Q5VUM1 108 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 PTRHD1Q6GMV3 140 aaKnown RBP14.34□□□□□ -0.11
CTNS-202ENST00000381870 NOXRED1Q6NXP6 359 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 USP30Q70CQ3 517 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 SYT12Q8IV01 421 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 ZNF655Q8N720 491 aaPredicted RBP14.34□□□□□ -0.11
CTNS-202ENST00000381870 KLHL15Q96M94 604 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 KCTD7Q96MP8 289 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 RPRD1AQ96P16 312 aaPredicted RBP14.34□□□□□ -0.11
CTNS-202ENST00000381870 TCF25Q9BQ70 676 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 BOCQ9BWV1 1114 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 MED28Q9H204 178 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 PCDHGC4Q9Y5F7 938 aa14.34□□□□□ -0.11
CTNS-202ENST00000381870 TLR4O00206 839 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 SOX14O95416 240 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 HMBSP08397 361 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 RRASP10301 218 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 AMD1P17707 334 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 NNMTP40261 264 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 CTBP2P56545 445 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 PPP3R1P63098 170 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 ZNF91Q05481 1191 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 GAB1Q13480 694 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 RGNQ15493 299 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 MSANTD1Q6ZTZ1 278 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 OR10Z1Q8NGY1 313 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 UCN3Q969E3 161 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 DACT3Q96B18 629 aaPredicted RBP14.33□□□□□ -0.12
CTNS-202ENST00000381870 C1GALT1C1Q96EU7 318 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 CMTM7Q96FZ5 175 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 PDFQ9HBH1 243 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.33□□□□□ -0.12
CTNS-202ENST00000381870 SLCO1C1Q9NYB5 712 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 PRR23AA6NEV1 266 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 TNFRSF10BO14763 440 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 ZNF623O75123 536 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 STK16O75716 305 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 NCR1O76036 304 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 SLC25A27O95847 323 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 TBX18O95935 607 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 CFDP00746 253 aaPredicted RBP14.33□□□□□ -0.12
CTNS-202ENST00000381870 ODC1P11926 461 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 AVPR1BP47901 424 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 RBBP4Q09028 425 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 NCF4Q15080 339 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 COL28A1Q2UY09 1125 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 KLHL12Q53G59 568 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 MFSD14CQ5VZR4 134 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 OTOP2Q7RTS6 562 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 ADGRG3Q86Y34 549 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 CLDN19Q8N6F1 224 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 LRRC17Q8N6Y2 441 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 PROKR2Q8NFJ6 384 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 TM9SF4Q92544 642 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 AP3S1Q92572 193 aa14.33□□□□□ -0.12
CTNS-202ENST00000381870 RBPMSQ93062 196 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms