RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 RBCK1Q9BYM8 510 aa11.96□□□□□ -0.5
SMN1-202ENST00000380707 TGIF2Q9GZN2 237 aa11.96□□□□□ -0.5
SMN1-202ENST00000380707 AKTIPQ9H8T0 292 aa11.96□□□□□ -0.5
SMN1-202ENST00000380707 MEAF6Q9HAF1 191 aa11.96□□□□□ -0.5
SMN1-202ENST00000380707 LYRM4Q9HD34 91 aa11.96□□□□□ -0.5
SMN1-202ENST00000380707 MKKSQ9NPJ1 570 aaPredicted RBP11.96□□□□□ -0.5
SMN1-202ENST00000380707 SIRT5Q9NXA8 310 aa11.96□□□□□ -0.5
SMN1-202ENST00000380707 IL17BQ9UHF5 180 aa11.96□□□□□ -0.5
SMN1-202ENST00000380707 GPN3Q9UHW5 284 aaPredicted RBP11.96□□□□□ -0.5
SMN1-202ENST00000380707 ADAM29Q9UKF5 820 aa11.96□□□□□ -0.5
SMN1-202ENST00000380707 FBXW2Q9UKT8 454 aa11.96□□□□□ -0.5
SMN1-202ENST00000380707 ASB4Q9Y574 426 aa11.96□□□□□ -0.5
SMN1-202ENST00000380707 NBEAQ8NFP9 2946 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 ITPR1Q14643 2758 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 OR2W5A6NFC9 320 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 C21orf140B9A014 251 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 SLCO1B7G3V0H7 640 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 TAF4O00268 1085 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 POLR3GO15318 223 aaPredicted RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 CDC123O75794 336 aaPredicted RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 FAM58BPP0C7Q3 252 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 RNH1P13489 461 aaKnown RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 LIFP15018 202 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 EIF2S3P41091 472 aaKnown RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 HNRNPH2P55795 449 aaKnown RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 RPS18P62269 152 aaKnown RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 OCA2Q04671 838 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 DNASE1L3Q13609 305 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 C6orf136Q5SQH8 315 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 GPR180Q86V85 440 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 PRSS58Q8IYP2 241 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 TBC1D20Q96BZ9 403 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 MIEF2Q96C03 454 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 TUBGCP3Q96CW5 907 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 CSF3RQ99062 836 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 SPSB2Q99619 263 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 EBPLQ9BY08 206 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 GPR87Q9BY21 358 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 DPH1Q9BZG8 443 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 ACTL8Q9H568 366 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 SOX17Q9H6I2 414 aaPredicted RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 WDR55Q9H6Y2 383 aaPredicted RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 WDR54Q9H977 334 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 GPN2Q9H9Y4 310 aaPredicted RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 PFDN4Q9NQP4 134 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 RIC8BQ9NVN3 520 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 MCM8Q9UJA3 840 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 FARSAQ9Y285 508 aaKnown RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 RAXQ9Y2V3 346 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 ATG4BQ9Y4P1 393 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 POLR3HQ9Y535 204 aaPredicted RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 MRPS18BQ9Y676 258 aaKnown RBP11.95□□□□□ -0.5
SMN1-202ENST00000380707 USH1CQ9Y6N9 552 aa11.95□□□□□ -0.5
SMN1-202ENST00000380707 GNG14A0A1W2PPG7 69 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 ARHGAP10A1A4S6 786 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 TRPC5OSA6NMA1 111 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 CYR61O00622 381 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 SDHDO14521 159 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 KLK10O43240 276 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 PROM1O43490 865 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 PCDH7O60245 1069 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 FHP07954 510 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 VIMP08670 466 aaKnown RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 ANXA4P09525 319 aaPredicted RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 PTPN4P29074 926 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 EPHA3P29320 983 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 TIA1P31483 386 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMN1-202ENST00000380707 HNRNPFP52597 415 aaKnown RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 EFNA3P52797 238 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 MAPK12P53778 367 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 RAB38P57729 211 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 RPS15P62841 145 aaKnown RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 RPL38P63173 70 aaKnown RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 KLC1Q07866 573 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 ATMQ13315 3056 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 SLC9B1Q4ZJI4 515 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 ATP6AP1LQ52LC2 224 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 NOXRED1Q6NXP6 359 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 RIPOR1Q6ZS17 1223 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 LARP4Q71RC2 724 aaKnown RBP eCLIP11.94□□□□□ -0.5
SMN1-202ENST00000380707 FAM47BQ8NA70 645 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 TMEM52Q8NDY8 209 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 KIAA1143Q96AT1 154 aaPredicted RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 THOC1Q96FV9 657 aaKnown RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 METTL2AQ96IZ6 378 aaKnown RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 PPP3R2Q96LZ3 170 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 ZNF317Q96PQ6 595 aaPredicted RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 OR1F2PQ96R84 312 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 LANCL2Q9NS86 450 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 FGFR1OP2Q9NVK5 253 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 LYARQ9NX58 379 aaKnown RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 KCND3Q9UK17 655 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 TCFL5Q9UL49 500 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 DLGAP4Q9Y2H0 992 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 PTRH2Q9Y3E5 179 aaKnown RBP11.94□□□□□ -0.5
SMN1-202ENST00000380707 PCDHGA6Q9Y5G7 932 aa11.94□□□□□ -0.5
SMN1-202ENST00000380707 URB1O60287 2271 aaKnown RBP11.93□□□□□ -0.5
SMN1-202ENST00000380707 CCDC88CQ9P219 2028 aa11.93□□□□□ -0.5
SMN1-202ENST00000380707 GOLGA8QA0A0J9YX86 632 aa11.93□□□□□ -0.5
SMN1-202ENST00000380707 A0A1W2PR48 441 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms