RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 A0A1B0GVT2 93 aa15.44■□□□□ 0.06
COL2A1-202ENST00000380518 IL3P08700 152 aa15.44■□□□□ 0.06
COL2A1-202ENST00000380518 HOXD8P13378 290 aaPredicted RBP15.44■□□□□ 0.06
COL2A1-202ENST00000380518 TYRP1P17643 537 aa15.44■□□□□ 0.06
COL2A1-202ENST00000380518 POLR2CP19387 275 aaPredicted RBP15.44■□□□□ 0.06
COL2A1-202ENST00000380518 CELP19835 753 aa15.44■□□□□ 0.06
COL2A1-202ENST00000380518 GPRIN1Q7Z2K8 1008 aa15.44■□□□□ 0.06
COL2A1-202ENST00000380518 FANK1Q8TC84 345 aa15.44■□□□□ 0.06
COL2A1-202ENST00000380518 OR8D2Q9GZM6 311 aa15.44■□□□□ 0.06
COL2A1-202ENST00000380518 METTL7AQ9H8H3 244 aa15.44■□□□□ 0.06
COL2A1-202ENST00000380518 MLXQ9UH92 298 aa15.44■□□□□ 0.06
COL2A1-202ENST00000380518 FMN2Q9NZ56 1722 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 A0A1B0GVI7 797 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 ZSCAN5BA6NJL1 495 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 ENTPD1P49961 510 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 NIPAL4Q0D2K0 466 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 ZMYND11Q15326 602 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 FAM214AQ32MH5 1076 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 CCSAPQ6IQ19 270 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-202ENST00000380518 OR10T2Q8NGX3 314 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 SUN3Q8TAQ9 357 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL2A1-202ENST00000380518 NSMAFQ92636 917 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 SHDQ96IW2 340 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PRODH2Q9UF12 536 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 KCPQ6ZWJ8 1503 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 FDXRP22570 491 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 GRK5P34947 590 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 STK19P49842 368 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-202ENST00000380518 ID2Q02363 134 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 HNRNPA0Q13151 305 aaKnown RBP15.43■□□□□ 0.06
COL2A1-202ENST00000380518 INAVAQ3KP66 663 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PLEKHG7Q6ZR37 379 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 TMED4Q7Z7H5 227 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 OR2M4Q96R27 311 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 HRASLS2Q9NWW9 162 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 GRXCR1A8MXD5 290 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 H0YJX3 145 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 RAB39AQ14964 217 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 RAB30Q15771 203 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 FLYWCH1Q4VC44 716 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PSAPL1Q6NUJ1 521 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 LMX1AQ8TE12 382 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 KLHDC7BQ96G42 594 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 GPR62Q9BZJ7 368 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PTGES2Q9H7Z7 377 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 MTMR10Q9NXD2 777 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 NOP16Q9Y3C1 178 aaKnown RBP15.43■□□□□ 0.06
COL2A1-202ENST00000380518 ABCC6O95255 1503 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 RICTORQ6R327 1708 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PAK4O96013 591 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-202ENST00000380518 HCKP08631 526 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 OR12D1P0DN82 309 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PVALBP20472 110 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-202ENST00000380518 CD9P21926 228 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 MLLT1Q03111 559 aaPredicted RBP15.43■□□□□ 0.06
COL2A1-202ENST00000380518 COQ5Q5HYK3 327 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PDSS1Q5T2R2 415 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PHF19Q5T6S3 580 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 CENPSQ8N2Z9 138 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 OR8J1Q8NGP2 316 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 CNIH3Q8TBE1 160 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 FIZ1Q96SL8 496 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PHOX2BQ99453 314 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 TIGARQ9NQ88 270 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 SCP2D1Q9UJQ7 156 aa15.43■□□□□ 0.06
COL2A1-202ENST00000380518 PARP4Q9UKK3 1724 aaKnown RBP15.42■□□□□ 0.06
COL2A1-202ENST00000380518 LMO7Q8WWI1 1683 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 ZNF840PA6NDX5 716 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 EDNRBP24530 442 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 IST1P53990 364 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 DNASE1L3Q13609 305 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 MSANTD1Q6ZTZ1 278 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 OR2T33Q8NG76 320 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 CMKLR1Q99788 373 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 AIFM2Q9BRQ8 373 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 XKR8Q9H6D3 395 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 ADAMTS6Q9UKP5 1117 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 PCP4L1A6NKN8 68 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 A8MU76 341 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 LRRN3E7EW58 273 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 SOX1O00570 391 aaPredicted RBP15.42■□□□□ 0.06
COL2A1-202ENST00000380518 VEGFDO43915 354 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 KCNC1P48547 511 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 CDKN2DP55273 166 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 ABRAXAS2Q15018 415 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 MFSD2AQ8NA29 543 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 POLDIP3Q9BY77 421 aaKnown RBP15.42■□□□□ 0.06
COL2A1-202ENST00000380518 LRRN3Q9H3W5 708 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 ROBO1Q9Y6N7 1651 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 MUSKO15146 869 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 ATF4P18848 351 aaPredicted RBP15.42■□□□□ 0.06
COL2A1-202ENST00000380518 HMGCLP35914 325 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 EIF1AXP47813 144 aaKnown RBP15.42■□□□□ 0.06
COL2A1-202ENST00000380518 OCLNQ16625 522 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 SLC44A3Q8N4M1 653 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 TEPSINQ96N21 525 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 IGKV6-21A0A0C4DH24 114 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 SMIM30A4D0T7 59 aa15.42■□□□□ 0.06
COL2A1-202ENST00000380518 C2orf74A8MZ97 194 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms