RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 PLD2O14939 933 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 SCG5P05408 212 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 HBQ1P09105 142 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 CSNK1DP48730 415 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 NKX3-2P78367 333 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 CDK10Q15131 360 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 SEC23BQ15437 767 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 TIMM50Q3ZCQ8 353 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 PLEKHS1Q5SXH7 462 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 LIPKQ5VXJ0 399 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 DPY19L3Q6ZPD9 716 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 FLCNQ8NFG4 579 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 OR52N2Q8NGI0 321 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 C9orf43Q8TAL5 461 aaPredicted RBP17.2■□□□□ 0.34
GNE-201ENST00000377902 C17orf50Q8WW18 174 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 TMCO6Q96DC7 493 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 WRAP53Q9BUR4 548 aaKnown RBP17.2■□□□□ 0.34
GNE-201ENST00000377902 NUFIP1Q9UHK0 495 aaKnown RBP17.2■□□□□ 0.34
GNE-201ENST00000377902 TRAPPC4Q9Y296 219 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 SNX11Q9Y5W9 270 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 USP34Q70CQ2 3546 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 PCM1Q15154 2024 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 A0A075B6Q4 140 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 SEMA7AO75326 666 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 PDHA2P29803 388 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 HNF4AP41235 474 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 ELAVL2Q12926 359 aaKnown RBP17.2■□□□□ 0.34
GNE-201ENST00000377902 SP140Q13342 867 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 CAMKMTQ7Z624 323 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 LAS2Q8IYD9 372 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 GPR65Q8IYL9 337 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 WFDC6Q9BQY6 131 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 PRRG3Q9BZD7 231 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 SRRQ9GZT4 340 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 NPAP1Q9NZP6 1156 aa17.2■□□□□ 0.34
GNE-201ENST00000377902 LSM2Q9Y333 95 aaKnown RBP17.2■□□□□ 0.34
GNE-201ENST00000377902 RFXAPO00287 272 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 EIF3FO00303 357 aaPredicted RBP17.19■□□□□ 0.34
GNE-201ENST00000377902 KPNA5O15131 536 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 TSPAN6O43657 245 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 IMPA1P29218 277 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 PBLDP30039 288 aaPredicted RBP17.19■□□□□ 0.34
GNE-201ENST00000377902 SPHARQ15513 63 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 ZNF770Q6IQ21 691 aaPredicted RBP17.19■□□□□ 0.34
GNE-201ENST00000377902 TMIGD1Q6UXZ0 262 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 Q6ZNB5 142 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 Q6ZVL8 140 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 COMMD6Q7Z4G1 85 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 TAGAPQ8N103 731 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 GEMIN6Q8WXD5 167 aaKnown RBP17.19■□□□□ 0.34
GNE-201ENST00000377902 ZFYVE19Q96K21 471 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 SLC6A18Q96N87 628 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 SNX18Q96RF0 628 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 SORBS1Q9BX66 1292 aaKnown RBP17.19■□□□□ 0.34
GNE-201ENST00000377902 REEP4Q9H6H4 257 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 C3orf14Q9HBI5 128 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 ABCB9Q9NP78 766 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 ASAH2Q9NR71 780 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 CNOT2Q9NZN8 540 aaKnown RBP17.19■□□□□ 0.34
GNE-201ENST00000377902 TMA7Q9Y2S6 64 aaKnown RBP17.19■□□□□ 0.34
GNE-201ENST00000377902 UGDHO60701 494 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 UGT2B17O75795 530 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 KLHL18O94889 574 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 ITGA2P17301 1181 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 CTSCP53634 463 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 PSPHP78330 225 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 CYP4F8P98187 520 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 HOXC5Q00444 222 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 C2orf80Q0P641 193 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 HYAL2Q12891 473 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 HSD11B1LQ7Z5J1 315 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 RBM45Q8IUH3 476 aaKnown RBP17.19■□□□□ 0.34
GNE-201ENST00000377902 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.19■□□□□ 0.34
GNE-201ENST00000377902 TRIM48Q8IWZ4 208 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 CMTM8Q8IZV2 173 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 PCSK9Q8NBP7 692 aaKnown RBP17.19■□□□□ 0.34
GNE-201ENST00000377902 ZNF461Q8TAF7 563 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 ASZ1Q8WWH4 475 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 SLC25A19Q9HC21 320 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 PCDHGB2Q9Y5G2 931 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 ENPP4Q9Y6X5 453 aa17.19■□□□□ 0.34
GNE-201ENST00000377902 TLR4O00206 839 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 NRG2O14511 850 aaPredicted RBP17.18■□□□□ 0.34
GNE-201ENST00000377902 SLC16A5O15375 505 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 ETV3P41162 512 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 RORCP51449 518 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 HMGA2P52926 109 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 TEKQ02763 1124 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 LRRC74AQ0VAA2 488 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 IQCF1Q8N6M8 205 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 FAM46DQ8NEK8 389 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 AUTS2Q8WXX7 1259 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 ECHDC3Q96DC8 303 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 MAPKAP1Q9BPZ7 522 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 POLR2J2Q9GZM3 115 aaKnown RBP17.18■□□□□ 0.34
GNE-201ENST00000377902 SMG9Q9H0W8 520 aaKnown RBP17.18■□□□□ 0.34
GNE-201ENST00000377902 BRF2Q9HAW0 419 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 YARS2Q9Y2Z4 477 aaKnown RBP17.18■□□□□ 0.34
GNE-201ENST00000377902 SH3D21A4FU49 640 aa17.18■□□□□ 0.34
GNE-201ENST00000377902 FADS2P1A8MWK0 482 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms