RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 EHD1Q9H4M9 534 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 ATP6V1HQ9UI12 483 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 HTR3EA5X5Y0 456 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 E9PQ18 207 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 RGS5O15539 181 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 TPST2O60704 377 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 BCHEP06276 602 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 C1GALT1C1LP0DN25 315 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 GABRB1P18505 474 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 CHMP24386 653 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 UGT2B10P36537 528 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 C21orf58P58505 322 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 RASGRP3Q8IV61 690 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 SLC7A5P1Q8MH63 180 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 KIAA1958Q8N8K9 716 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 GEMIN6Q8WXD5 167 aaKnown RBP17.31■□□□□ 0.36
SF1-203ENST00000377387 TIFAQ96CG3 184 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 CNPPD1Q9BV87 410 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 NUAK2Q9H093 628 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 MARCH7Q9H992 704 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 DNAJC27Q9NZQ0 273 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 IL36AQ9UHA7 158 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 PLXND1Q9Y4D7 1925 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 TRBV4-1A0A0J9YWV2 114 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 KLHL18O94889 574 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 ITGA2P17301 1181 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 SYN1P17600 705 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 RCVRNP35243 200 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 SOX3P41225 446 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 NTHL1P78549 312 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 HIST2H2AA3Q6FI13 130 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 CEACAM20Q6UY09 585 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 OLIG3Q7RTU3 272 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 CAMKMTQ7Z624 323 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 RBM45Q8IUH3 476 aaKnown RBP17.31■□□□□ 0.36
SF1-203ENST00000377387 METTL4Q8N3J2 472 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 CELF5Q8N6W0 485 aaKnown RBP17.31■□□□□ 0.36
SF1-203ENST00000377387 KBTBD8Q8NFY9 601 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 YME1L1Q96TA2 773 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 SPHK2Q9NRA0 654 aa17.31■□□□□ 0.36
SF1-203ENST00000377387 GSTT2P0CG29 244 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 GSTT2BP0CG30 244 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 PCSK2P16519 638 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 HOXD12P35452 270 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 XCR1P46094 333 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 ATAD3BQ5T9A4 648 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 TMEM53Q6P2H8 277 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 WDR53Q7Z5U6 358 aaPredicted RBP17.3■□□□□ 0.36
SF1-203ENST00000377387 DENND6BQ8NEG7 585 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 VN1R2Q8NFZ6 395 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 OTUB1Q96FW1 271 aaPredicted RBP17.3■□□□□ 0.36
SF1-203ENST00000377387 TPK1Q9H3S4 243 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 CXorf36Q9H7Y0 433 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 CLEC2DQ9UHP7 191 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 WDR37Q9Y2I8 494 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 H3BN98 237 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 CSF2RAP15509 400 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 NR4A2P43354 598 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 ZNF33BQ06732 778 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 NFE2L1Q14494 772 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 TECPR1Q7Z6L1 1165 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 OXR1Q8N573 874 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.3■□□□□ 0.361e-8■□□□□ 10.2
SF1-203ENST00000377387 REPS1Q96D71 796 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 SIAEQ9HAT2 523 aa17.3■□□□□ 0.36
SF1-203ENST00000377387 A0A0G2JN53 185 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 WWP2O00308 870 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 ENTPD6O75354 484 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 FGF18O76093 207 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 MED26O95402 600 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 IFNW1P05000 195 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 PTGER1P34995 402 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 PIK3CBP42338 1070 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 TGM4P49221 684 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 UGT2B15P54855 530 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 LIM2P55344 173 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 TAP2Q03519 686 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 HSPB3Q12988 150 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 PUM1Q14671 1186 aaKnown RBP eCLIP17.29■□□□□ 0.365e-7■□□□□ 9.8
SF1-203ENST00000377387 RAET1GQ6H3X3 334 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 DEF8Q6ZN54 512 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 CELF2-AS1Q8N7Q2 184 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 CEP19Q96LK0 163 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 ZDHHC4Q9NPG8 344 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 FKBP14Q9NWM8 211 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 PCDHGA3Q9Y5H0 932 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 ENPP4Q9Y6X5 453 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 PNMA8CA0A1B0GUJ8 204 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 C5orf58C9J3I9 102 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 ARHGAP33O14559 1287 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 DPM1O60762 260 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 DSTNP60981 165 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 FCHO2Q0JRZ9 810 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 ZNF805Q5CZA5 627 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 ZNF697Q5TEC3 545 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 FRMPD2BQ6IN97 320 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 FAM71E1Q6IPT2 247 aa17.29■□□□□ 0.36
SF1-203ENST00000377387 CCBE1Q6UXH8 406 aaPredicted RBP17.29■□□□□ 0.36
SF1-203ENST00000377387 PARS2Q7L3T8 475 aaKnown RBP17.29■□□□□ 0.36
SF1-203ENST00000377387 AKAP14Q86UN6 197 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms