RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 RFXAPO00287 272 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 HOXC11O43248 304 aaPredicted RBP14.52□□□□□ -0.09
MSH5-203ENST00000375750 LRRTM2O43300 516 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 SOX14O95416 240 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 GASTP01350 101 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 FHP07954 510 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 C1SP09871 688 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 CNR2P34972 360 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 PBX2P40425 430 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 SLC15A1P46059 708 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 GPM6BQ13491 265 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 PAQR6Q6TCH4 344 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 C11orf65Q8NCR3 313 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 ZNF707Q96C28 371 aaPredicted RBP14.52□□□□□ -0.09
MSH5-203ENST00000375750 TRNT1Q96Q11 434 aaKnown RBP14.52□□□□□ -0.09
MSH5-203ENST00000375750 OR2A14Q96R47 310 aa14.52□□□□□ -0.09
MSH5-203ENST00000375750 MCCC1Q96RQ3 725 aaPredicted RBP14.52□□□□□ -0.09
MSH5-203ENST00000375750 DDX6P26196 483 aaKnown RBP eCLIP14.51□□□□□ -0.09
MSH5-203ENST00000375750 HTR3AP46098 478 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 BDKRB1P46663 353 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 CSNK2BP67870 215 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 SHHQ15465 462 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 LY6G5CQ5SRR4 150 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 LAX1Q8IWV1 398 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 CPA6Q8N4T0 437 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 IRF7Q92985 503 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 FCRL1Q96LA6 429 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 SNTG1Q9NSN8 517 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 ZNF221Q9UK13 617 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 PLXNB3Q9ULL4 1909 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 ARHGEF33A8MVX0 844 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 SEMA3DO95025 777 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 FGF19O95750 216 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 APOA1P02647 267 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 RB1P06400 928 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 OR56A5P0C7T3 313 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 SRCP12931 536 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 TYRP14679 529 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 HOXB6P17509 224 aaKnown RBP14.51□□□□□ -0.09
MSH5-203ENST00000375750 PCGF2P35227 344 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 RFX2P48378 723 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 RPS13P62277 151 aaKnown RBP14.51□□□□□ -0.09
MSH5-203ENST00000375750 DAB2P98082 770 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 LYPLAL1Q5VWZ2 237 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 TMC5Q6UXY8 1006 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 MSANTD1Q6ZTZ1 278 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 AQP11Q8NBQ7 271 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 LRRC3BQ96PB8 259 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 SLC30A2Q9BRI3 323 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 ACER3Q9NUN7 267 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 DNAJC27Q9NZQ0 273 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 PNMA8CA0A1B0GUJ8 204 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 MGAT4DA6NG13 374 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 AGAP14A8MT82 685 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 CBSLP0DN79 551 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 WEE1P30291 646 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 CBSP35520 551 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 MEF2AQ02078 507 aaPredicted RBP14.51□□□□□ -0.09
MSH5-203ENST00000375750 SCARB2Q14108 478 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 ZNF77Q15935 545 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 IFI44LQ53G44 452 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 METTL2BQ6P1Q9 378 aaKnown RBP14.51□□□□□ -0.09
MSH5-203ENST00000375750 PTCHD4Q6ZW05 846 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 UBQLNLQ8IYU4 475 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 FAM9CQ8IZT9 166 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 HUS1BQ8NHY5 278 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 ASPNQ9BXN1 380 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 ZDHHC6Q9H6R6 413 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 SPHK2Q9NRA0 654 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 SPATA6Q9NWH7 488 aaPredicted RBP14.51□□□□□ -0.09
MSH5-203ENST00000375750 RAB23Q9ULC3 237 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 SH2B3Q9UQQ2 575 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 RUVBL1Q9Y265 456 aaKnown RBP14.51□□□□□ -0.09
MSH5-203ENST00000375750 POFUT2Q9Y2G5 429 aa14.51□□□□□ -0.09
MSH5-203ENST00000375750 YBX2Q9Y2T7 364 aaKnown RBP14.51□□□□□ -0.09
MSH5-203ENST00000375750 WBP11Q9Y2W2 641 aaKnown RBP14.51□□□□□ -0.09
MSH5-203ENST00000375750 SPTBN5Q9NRC6 3674 aaKnown RBP14.5□□□□□ -0.09
MSH5-203ENST00000375750 GFYI3L273 518 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 ADAMDEC1O15204 470 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 ENTPD6O75354 484 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 KRT75O95678 551 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 C8GP07360 202 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 HNRNPA1P09651 372 aaKnown RBP eCLIP14.5□□□□□ -0.09
MSH5-203ENST00000375750 CXCR2P25025 360 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 RNF130Q86XS8 419 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 CELF5Q8N6W0 485 aaKnown RBP14.5□□□□□ -0.09
MSH5-203ENST00000375750 OPALINQ96PE5 141 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 PKP4Q99569 1192 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 SLC35A5Q9BS91 424 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 BRD9Q9H8M2 597 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 SMURF1Q9HCE7 757 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 MRPS23Q9Y3D9 190 aaKnown RBP14.5□□□□□ -0.09
MSH5-203ENST00000375750 ATP1B2P14415 290 aaPredicted RBP14.5□□□□□ -0.09
MSH5-203ENST00000375750 ZNF8P17098 575 aaPredicted RBP14.5□□□□□ -0.09
MSH5-203ENST00000375750 CYP2A7P20853 494 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 CHMP24386 653 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 SOX6P35712 828 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 CSNK1DP48730 415 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 DEFA1P59665 94 aa14.5□□□□□ -0.09
MSH5-203ENST00000375750 DEFA3P59666 94 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms