RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 FAM153BP0C7A2 387 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 MAN2A2P49641 1150 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 ASCL1P50553 236 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 CRADDP78560 199 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 CDK16Q00536 496 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 CAV1Q03135 178 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 HSPB2Q16082 182 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 PHKG1Q16816 387 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 BBS9Q3SYG4 887 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 FAM153CQ494X1 144 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 SHEQ5VZ18 495 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 ARMC3Q5W041 872 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 LCTLQ6UWM7 567 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 TRILQ7L0X0 811 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 PALM2Q8IXS6 379 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 APCDD1LQ8NCL9 501 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 KCNJ9Q92806 393 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 FAM173AQ9BQD7 235 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 KIFC1Q9BW19 673 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 ZNF395Q9H8N7 513 aaPredicted RBP13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 MTRF1LQ9UGC7 380 aaKnown RBP13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 MMACHCQ9Y4U1 282 aa13.79□□□□□ -0.2
CDKN1A-202ENST00000373711 IGKV3D-11A0A0A0MRZ8 115 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 A8MUA0 341 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 LCMT2O60294 686 aaKnown RBP13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 BANF1O75531 89 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 MYO1DO94832 1006 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 SERPIND1P05546 499 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 MAOAP21397 527 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 CCR8P51685 355 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 OLR1P78380 273 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 DAZAP2Q15038 168 aaPredicted RBP13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 MSS51Q4VC12 460 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 HECTD2Q5U5R9 776 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 TMEM198Q66K66 360 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 KIAA0930Q6ICG6 404 aaPredicted RBP13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 CILP2Q8IUL8 1156 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 AGGF1Q8N302 714 aaeCLIP13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 EIF1ADQ8N9N8 165 aaKnown RBP13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 RNASE6Q93091 150 aaKnown RBP13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 ARSGQ96EG1 525 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 MFSD3Q96ES6 412 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 SERPINB12Q96P63 405 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 SMR3AQ99954 134 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 EXO5Q9H790 373 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 IL1RL2Q9HB29 575 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 BEX4Q9NWD9 120 aaPredicted RBP13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 GALPQ9UBC7 116 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 CBLCQ9ULV8 474 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 COMMD10Q9Y6G5 202 aa13.78□□□□□ -0.2
CDKN1A-202ENST00000373711 UQCRHLA0A096LP55 91 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 TRBC2A0A5B9 178 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 GOLGA8KD6RF30 607 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 GOLGA8TH3BQL2 631 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 ARHGEF9O43307 516 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 OR1F1O43749 312 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 HCN1O60741 890 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 GLSO94925 669 aaPredicted RBP13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 FN1P02751 2386 aaKnown RBP13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 ZNF888P0CJ79 500 aaPredicted RBP13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 CDH1P12830 882 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 ARNTP27540 789 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 HOXC12P31275 282 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 ADH7P40394 386 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 BTG2P78543 158 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 RTL6Q6ICC9 239 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 IL20RBQ6UXL0 311 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 RTL4Q6ZR62 310 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 STRA8Q7Z7C7 330 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 KIF18BQ86Y91 864 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 LIX1LQ8IVB5 337 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 NT5CQ8TCD5 201 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 ALKBH8Q96BT7 664 aaKnown RBP13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 DEPPQ9NTK1 212 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 SOX13Q9UN79 622 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 PPIEQ9UNP9 301 aaKnown RBP13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 PCDHGB3Q9Y5G1 929 aa13.77□□□□□ -0.21
CDKN1A-202ENST00000373711 C8GP07360 202 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 HIST1H2AGP0C0S8 130 aaPredicted RBP13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 MLNP12872 115 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 HIST1H2ADP20671 130 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 CNR1P21554 472 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 TACR1P25103 407 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 MGAT1P26572 445 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 MAGEA3P43357 314 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 MAGEA5P43359 124 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 RGS4P49798 205 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 DCAF7P61962 342 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 SARNPP82979 210 aaKnown RBP13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 DHX9Q08211 1270 aaKnown RBP13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 CBLBQ13191 982 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 SP140Q13342 867 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 SNTB1Q13884 538 aaKnown RBP13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 SLC10A1Q14973 349 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 PCBP2Q15366 365 aaKnown RBP eCLIP13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 FBXL19-AS1Q494R0 122 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 HP1BP3Q5SSJ5 553 aaPredicted RBP13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 UGT3A1Q6NUS8 523 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 NEPROQ6NW34 567 aa13.76□□□□□ -0.21
CDKN1A-202ENST00000373711 AGTRAPQ6RW13 159 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms