RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 WDR12Q9GZL7 423 aaKnown RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 RERGLQ9H628 205 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 MYNNQ9NPC7 610 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 HRASLS2Q9NWW9 162 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 MAT2BQ9NZL9 334 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 VAPAQ9P0L0 249 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 NFKBIL1Q9UBC1 381 aaPredicted RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 NEU3Q9UQ49 428 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 RPL36Q9Y3U8 105 aaKnown RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ENTPD2Q9Y5L3 495 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 GPC6Q9Y625 555 aaPredicted RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 SH3PXD2BA1X283 911 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ZNF99A8MXY4 864 aaPredicted RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 CLDN25C9JDP6 229 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 CHST10O43529 356 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 CLEC3AO75596 197 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 FHP07954 510 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ACPPP15309 386 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 S100A1P23297 94 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 CAPZA2P47755 286 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 HK3P52790 923 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 CASP9P55211 416 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 TRA2BP62995 288 aaKnown RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 DPTQ07507 201 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 TARDBPQ13148 414 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 SLAMF1Q13291 335 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 GK3PQ14409 553 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 CARTPTQ16568 116 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ZNF829Q3KNS6 432 aaPredicted RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 HSF5Q4G112 596 aaPredicted RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 IQCCQ4KMZ1 466 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 WDR45BQ5MNZ6 344 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 CATSPEREQ5SY80 951 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ZNF773Q6PK81 442 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ZNF852Q6ZMS4 543 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 RFLNAQ6ZTI6 216 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 SLCO6A1Q86UG4 719 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ADGRG5Q8IZF4 528 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 SLC34A3Q8N130 599 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 METTL25Q8N6Q8 603 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 POC5Q8NA72 575 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 FAM3CQ92520 227 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 GTF2H4Q92759 462 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 NXPE3Q969Y0 559 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 OCEL1Q9H607 264 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 OR6C2Q9NZP2 312 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 MGAT4BQ9UQ53 548 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 CAB39Q9Y376 341 aaPredicted RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 HSPE1-MOB4S4R3N1 261 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 TAF4O00268 1085 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 EMC8O43402 210 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 SLC25A12O75746 678 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 SERPINI2O75830 405 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 VNN2O95498 520 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 HMGN1P05114 100 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 TFAP2AP05549 437 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 SAGP10523 405 aaPredicted RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 POLR2CP19387 275 aaPredicted RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 IMPA1P29218 277 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 PDHA2P29803 388 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ARRB1P49407 418 aaPredicted RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ST3GAL3Q11203 375 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 IRF4Q15306 451 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 KLHL22Q53GT1 634 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 CEP68Q76N32 757 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 RETREG3Q86VR2 466 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 NLRP8Q86W28 1048 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 OR56A3Q8NH54 315 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 WDR36Q8NI36 951 aaKnown RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ELSPBP1Q96BH3 223 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ISOC1Q96CN7 298 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 MSANTD3Q96H12 275 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ALPK1Q96QP1 1244 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 ACTL8Q9H568 366 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 AGPAT4Q9NRZ5 378 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 DCAF13Q9NV06 445 aaKnown RBP5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 CFL2Q9Y281 166 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 PPIL1Q9Y3C6 166 aa5.09□□□□□ -1.59
SMNDC1-202ENST00000369603 RALGAPA2Q2PPJ7 1873 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 PRAMEF26H0Y7S4 382 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 GFYI3L273 518 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 TAPBPO15533 448 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 ABCB7O75027 752 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 POU2F2P09086 479 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 POU2F1P14859 743 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 TCF3P15923 654 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 ALAS2P22557 587 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 PSMA1P25786 263 aaKnown RBP5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 PSMA3P25788 255 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 CCR2P41597 374 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 MLLT3P42568 568 aaPredicted RBP5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 XKP51811 444 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 KCNAB2Q13303 367 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 GANABQ14697 944 aaKnown RBP5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 LASP1Q14847 261 aaKnown RBP5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 KIR2DS3Q14952 304 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 MINDY4Q4G0A6 757 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 CRB2Q5IJ48 1285 aa5.09□□□□□ -1.6
SMNDC1-202ENST00000369603 COLEC12Q5KU26 742 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms