RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 FTSJ1Q9UET6 329 aa13.66□□□□□ -0.22
CD48-201ENST00000368045 ACSL6Q9UKU0 697 aa13.66□□□□□ -0.22
CD48-201ENST00000368045 SH2B3Q9UQQ2 575 aa13.66□□□□□ -0.22
CD48-201ENST00000368045 PEX16Q9Y5Y5 336 aa13.66□□□□□ -0.22
CD48-201ENST00000368045 HTTP42858 3142 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 PRAMEF33A0A0G2JMD5 474 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 PRAMEF10O60809 474 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 ADAP00813 363 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 PRNPP04156 253 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 KLK1P06870 262 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 IL3P08700 152 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 S100A5P33763 92 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 SOAT1P35610 550 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 TGFBR1P36897 503 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 EIF2B2P49770 351 aaKnown RBP13.65□□□□□ -0.22
CD48-201ENST00000368045 ST8SIA6P61647 398 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 C19orf48Q6RUI8 117 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 TRAPPC5Q8IUR0 188 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 VN1R2Q8NFZ6 395 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 OR5P2Q8WZ92 322 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 RACGAP1Q9H0H5 632 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 OR2AG1Q9H205 316 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 MIEF1Q9NQG6 463 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 INIPQ9NRY2 104 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 MS4A12Q9NXJ0 267 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 RAB23Q9ULC3 237 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 GPR34Q9UPC5 381 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 IRAK3Q9Y616 596 aa13.65□□□□□ -0.22
CD48-201ENST00000368045 MN1Q10571 1320 aaPredicted RBP13.64□□□□□ -0.23
CD48-201ENST00000368045 PCDH17O14917 1159 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 DSCR3O14972 297 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 VEGFDO43915 354 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 KDM1AO60341 852 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 OXSR1O95747 527 aaPredicted RBP13.64□□□□□ -0.23
CD48-201ENST00000368045 PTTG1O95997 202 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 PTHP01270 115 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 GBAP04062 536 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 DBTP11182 482 aaKnown RBP13.64□□□□□ -0.23
CD48-201ENST00000368045 KELP23276 732 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 ACADLP28330 430 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 ETV6P41212 452 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 NUDT6P53370 316 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 CRISP1P54107 249 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 UGT2B15P54855 530 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 DPTQ07507 201 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 DNASE1L3Q13609 305 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 TSTA3Q13630 321 aaPredicted RBP13.64□□□□□ -0.23
CD48-201ENST00000368045 GRIN2CQ14957 1233 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 PTGES3Q15185 160 aaKnown RBP13.64□□□□□ -0.23
CD48-201ENST00000368045 COLEC12Q5KU26 742 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 PRAMEF14Q5SWL7 426 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 TPRG1LQ5T0D9 272 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 PRAMEF13Q5VWM6 474 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 FRMPD2BQ6IN97 320 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 TMIGD1Q6UXZ0 262 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 SLC9B2Q86UD5 537 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 SNX29P2Q8IUI4 249 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 TAGAPQ8N103 731 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 AQP11Q8NBQ7 271 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 B3GNT7Q8NFL0 401 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 ZNF296Q8WUU4 475 aaPredicted RBP13.64□□□□□ -0.23
CD48-201ENST00000368045 NUS1Q96E22 293 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 NEURL3Q96EH8 262 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 CDADC1Q9BWV3 514 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 TRIM39Q9HCM9 518 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 AMBNQ9NP70 447 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 SAGE1Q9NXZ1 904 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 TAAR2Q9P1P5 351 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 ANKMY1Q9P2S6 941 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 ITM2BQ9Y287 266 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 IFT52Q9Y366 437 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 TRIM17Q9Y577 477 aa13.64□□□□□ -0.23
CD48-201ENST00000368045 CFAP20Q9Y6A4 193 aaKnown RBP13.64□□□□□ -0.23
CD48-201ENST00000368045 PNMA8CA0A1B0GUJ8 204 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 SAP18O00422 153 aaKnown RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 KPNA3O00505 521 aaPredicted RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 TLL1O43897 1013 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 PDE9AO76083 593 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 SNX4O95219 450 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 RHOP08100 348 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 CISD3P0C7P0 127 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 DDCP20711 480 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 ITGB7P26010 798 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 SOX6P35712 828 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 GSTM5P46439 218 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 TMED10P49755 219 aaKnown RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 CASP9P55211 416 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 SNRPGP62308 76 aaKnown RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 SAXO2Q658L1 398 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 PLAG1Q6DJT9 500 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 ZNF770Q6IQ21 691 aaPredicted RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 NCCRP1Q6ZVX7 275 aaPredicted RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 TRMT11Q7Z4G4 463 aaKnown RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 FAM46DQ8NEK8 389 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 OR2L2Q8NH16 312 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 OR5AK3PQ8NH89 298 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 APOBEC4Q8WW27 367 aaKnown RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 ZNF764Q96H86 408 aaPredicted RBP13.63□□□□□ -0.23
CD48-201ENST00000368045 SLC6A16Q9GZN6 736 aa13.63□□□□□ -0.23
CD48-201ENST00000368045 C6orf62Q9GZU0 229 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms